RNA–Protein interactions for RNA: ENST00000441248.5

CXorf40A-209, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 2,411 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-209ENST00000441248 HAND2P61296 217 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 BYSLQ13895 437 aaKnown RBP17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 RBBP5Q15291 538 aaKnown RBP17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 QPCTQ16769 361 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 TAB2Q9NYJ8 693 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 SNX12Q9UMY4 172 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 TRPC6Q9Y210 931 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 DUSP10Q9Y6W6 482 aa17.43■□□□□ 0.38
CXorf40A-209ENST00000441248 TTC26A0AVF1 554 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 PECAM1P16284 738 aaPredicted RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 CASP1P29466 404 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 MYO1EQ12965 1108 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 ZC3H12AQ5D1E8 599 aaKnown RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 C3orf20Q8ND61 904 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 C1orf131Q8NDD1 294 aaKnown RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 IP6K1Q92551 441 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 CUL5Q93034 780 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 PURBQ96QR8 312 aaKnown RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 DNAJC7Q99615 494 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 CPSF2Q9P2I0 782 aaKnown RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 DNAJC8O75937 253 aaPredicted RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 MATR3P43243 847 aaKnown RBP eCLIP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 CAPRIN2Q6IMN6 1127 aaKnown RBP17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 MIS18BP1Q6P0N0 1132 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 PHKBQ93100 1093 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 LTBP4Q8N2S1 1624 aa17.42■□□□□ 0.38
CXorf40A-209ENST00000441248 RGPD2P0DJD1 1756 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 GMNCA6NCL1 334 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 SMNDC1O75940 238 aaKnown RBP eCLIP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 FAM153BP0C7A2 387 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 RPS6KA3P51812 740 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 KRT83P78385 493 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 TRAF1Q13077 416 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 SNX1Q13596 522 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 FAM153CQ494X1 144 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 TAX1BP1Q86VP1 789 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 FAM153AQ9UHL3 310 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 M0R2C6 588 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 BUB1BO60566 1050 aaPredicted RBP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 SEC16BQ96JE7 1060 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 PAG1Q9NWQ8 432 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 C15orf41Q9Y2V0 281 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 CCDC9Q9Y3X0 531 aaKnown RBP17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
CXorf40A-209ENST00000441248 MYO5AQ9Y4I1 1855 aaKnown RBP17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 HMGB1P1B2RPK0 211 aaPredicted RBP17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 FOXP2O15409 715 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 GCP02774 474 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 PDE6BP35913 854 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 PTPN12Q05209 780 aaKnown RBP17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 TICAM2Q86XR7 235 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 BAIAP2L1Q9UHR4 511 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 NWD2Q9ULI1 1742 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 AFMP43652 599 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 RAB27AP51159 221 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 CCDC47Q96A33 483 aaKnown RBP17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 SMARCAL1Q9NZC9 954 aa17.4■□□□□ 0.38
CXorf40A-209ENST00000441248 A0A087X0B3 334 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 MACROD2A1Z1Q3 448 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 UBE2Q2LH0YL09 131 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 ATP2C2O75185 946 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 CRELD2Q6UXH1 353 aaPredicted RBP17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 SH3RF1Q7Z6J0 888 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 NBPF5PQ86XG9 351 aaPredicted RBP17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 CCT6BQ92526 530 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 HVCN1Q96D96 273 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 NFAT5O94916 1531 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 C5orf60A6NFR6 353 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 ANP32DO95626 131 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 CARSP49589 748 aaKnown RBP17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 VAV2P52735 878 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 MREGQ8N565 214 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 IRAK4Q9NWZ3 460 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 LUC7L2Q9Y383 392 aaKnown RBP17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 CPDO75976 1380 aa17.39■□□□□ 0.37
CXorf40A-209ENST00000441248 CLSTN1O94985 981 aa17.38■□□□□ 0.37
CXorf40A-209ENST00000441248 RXRAP19793 462 aa17.38■□□□□ 0.37
CXorf40A-209ENST00000441248 UBXN1Q04323 297 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms