RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 MTMR7Q9Y216 660 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 RLFQ13129 1914 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 SGSM2O43147 1006 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 NMT2O60551 498 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 ADORA2AP29274 412 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 TBC1D10CQ8IV04 446 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 U2AF1L4Q8WU68 220 aaKnown RBP12.31□□□□□ -0.44
MCF2L-216ENST00000439475 TRIB2Q92519 343 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 DEFB118Q96PH6 123 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.44
MCF2L-216ENST00000439475 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-216ENST00000439475 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
MCF2L-216ENST00000439475 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
MCF2L-216ENST00000439475 B4E1Z4 1266 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 KDM4AO75164 1064 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
MCF2L-216ENST00000439475 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 SNRNP48Q6IEG0 339 aaKnown RBP12.3□□□□□ -0.44
MCF2L-216ENST00000439475 KCTD1Q719H9 257 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 CHST13Q8NET6 341 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 REPS2Q8NFH8 660 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 UBAC1Q9BSL1 405 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 ZSWIM5Q9P217 1185 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
MCF2L-216ENST00000439475 DIS3Q9Y2L1 958 aaKnown RBP12.3□□□□□ -0.44
MCF2L-216ENST00000439475 ZNFX1Q9P2E3 1918 aaKnown RBP12.29□□□□□ -0.44
MCF2L-216ENST00000439475 ERICH2A1L162 156 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 CCL14Q16627 93 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 TKFCQ3LXA3 575 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
MCF2L-216ENST00000439475 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 NPLOC4Q8TAT6 608 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 ZSCAN10Q96SZ4 725 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-216ENST00000439475 ZKSCAN3Q9BRR0 538 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 KAT14Q9H8E8 782 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
MCF2L-216ENST00000439475 PAK6Q9NQU5 681 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-216ENST00000439475 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-216ENST00000439475 PARP14Q460N5 1801 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 NEDD4P46934 1319 aa12.29□□□□□ -0.44
MCF2L-216ENST00000439475 MSCO60682 206 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 PTH1RQ03431 593 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 CACNB2Q08289 660 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-216ENST00000439475 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
MCF2L-216ENST00000439475 MAP3K21Q5TCX8 1036 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 ANKRD35Q8N283 1001 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 IL25Q9H293 177 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
MCF2L-216ENST00000439475 COBLO75128 1261 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 CYP21A2P08686 494 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 PDHBP11177 359 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 CNGA1P29973 690 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 TRIM32Q13049 653 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.45
MCF2L-216ENST00000439475 IFIT1BQ5T764 474 aaKnown RBP12.27□□□□□ -0.45
MCF2L-216ENST00000439475 BTNL9Q6UXG8 535 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 PNMA1Q8ND90 353 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 ACAD9Q9H845 621 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 GPCPD1Q9NPB8 672 aa12.27□□□□□ -0.45
MCF2L-216ENST00000439475 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 CDC45O75419 566 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 FARP2O94887 1054 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-216ENST00000439475 ALAS1P13196 640 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 ZNF543Q08ER8 600 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 SYDE2Q5VT97 1194 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 NECAB2Q7Z6G3 386 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 MSL3Q8N5Y2 521 aaKnown RBP12.26□□□□□ -0.45
MCF2L-216ENST00000439475 MAML3Q96JK9 1138 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 ANO2Q9NQ90 1003 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 PPP4R2Q9NY27 417 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 FLRT1Q9NZU1 646 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 NRBP1Q9UHY1 535 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 RIPK3Q9Y572 518 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
MCF2L-216ENST00000439475 TNKSO95271 1327 aa12.26□□□□□ -0.45
MCF2L-216ENST00000439475 FRMPD2Q68DX3 1309 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms