RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TMEM232C9JQI7 657 aa29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 SGSM2O43147 1006 aa29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 FCER1AP12319 257 aa29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 IKQ13123 557 aaPredicted RBP29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 CCDC178Q5BJE1 867 aa29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 IQCA1Q86XH1 822 aa29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 U2AF1L4Q8WU68 220 aaKnown RBP29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.14■■■□□ 2.266e-8■■■■■ 40.6
RAPGEF1-206ENST00000438647 CNNM2Q9H8M5 875 aa29.14■■■□□ 2.26
RAPGEF1-206ENST00000438647 COL11A1P12107 1806 aaPredicted RBP29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 ATP2A1O14983 1001 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 PLA2G6O60733 806 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 SGPL1O95470 568 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 PRKAR2AP13861 404 aaKnown RBP29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 MAP3K21Q5TCX8 1036 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 RCSD1Q6JBY9 416 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 DCAF4Q8WV16 495 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 TMEM47Q9BQJ4 181 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 KRT23Q9C075 422 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 SLC38A10Q9HBR0 1119 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 ZNF236Q9UL36 1845 aa29.13■■■□□ 2.25
RAPGEF1-206ENST00000438647 TNRC18O15417 2968 aaPredicted RBP29.12■■■□□ 2.25
RAPGEF1-206ENST00000438647 TRIM32Q13049 653 aa29.12■■■□□ 2.25
RAPGEF1-206ENST00000438647 CCL14Q16627 93 aa29.12■■■□□ 2.25
RAPGEF1-206ENST00000438647 MFSD14CQ5VZR4 134 aa29.12■■■□□ 2.25
RAPGEF1-206ENST00000438647 DEFB118Q96PH6 123 aa29.12■■■□□ 2.25
RAPGEF1-206ENST00000438647 KDM4AO75164 1064 aa29.11■■■□□ 2.25
RAPGEF1-206ENST00000438647 OAZ1P54368 228 aa29.11■■■□□ 2.25
RAPGEF1-206ENST00000438647 BMP2KLQ5H9B9 411 aa29.11■■■□□ 2.25
RAPGEF1-206ENST00000438647 SNRNP48Q6IEG0 339 aaKnown RBP29.11■■■□□ 2.25
RAPGEF1-206ENST00000438647 SHISA4Q96DD7 197 aa29.11■■■□□ 2.25
RAPGEF1-206ENST00000438647 U3KPZ7 1027 aaPredicted RBP29.11■■■□□ 2.25
RAPGEF1-206ENST00000438647 KCTD2Q14681 263 aa29.1■■■□□ 2.25
RAPGEF1-206ENST00000438647 CCDC96Q2M329 555 aa29.1■■■□□ 2.25
RAPGEF1-206ENST00000438647 KCTD1Q719H9 257 aa29.1■■■□□ 2.25
RAPGEF1-206ENST00000438647 DGKHQ86XP1 1220 aa29.1■■■□□ 2.25
RAPGEF1-206ENST00000438647 MMP19Q99542 508 aa29.1■■■□□ 2.25
RAPGEF1-206ENST00000438647 MTMR7Q9Y216 660 aa29.1■■■□□ 2.25
RAPGEF1-206ENST00000438647 B4E1Z4 1266 aa29.09■■■□□ 2.25
RAPGEF1-206ENST00000438647 CACNB2Q08289 660 aaPredicted RBP29.09■■■□□ 2.25
RAPGEF1-206ENST00000438647 CPXCR1Q8N123 301 aa29.09■■■□□ 2.25
RAPGEF1-206ENST00000438647 NPLOC4Q8TAT6 608 aa29.09■■■□□ 2.25
RAPGEF1-206ENST00000438647 TFRCP02786 760 aaKnown RBP29.08■■■□□ 2.25
RAPGEF1-206ENST00000438647 PTH1RQ03431 593 aa29.08■■■□□ 2.25
RAPGEF1-206ENST00000438647 TRDNQ13061 729 aa29.08■■■□□ 2.25
RAPGEF1-206ENST00000438647 OLFML2BQ68BL8 750 aa29.08■■■□□ 2.25
RAPGEF1-206ENST00000438647 KIAA1211Q6ZU35 1233 aa29.08■■■□□ 2.25
RAPGEF1-206ENST00000438647 CHMP4CQ96CF2 233 aa29.08■■■□□ 2.25
RAPGEF1-206ENST00000438647 PDE4DIPQ5VU43 2346 aa29.07■■■□□ 2.24
RAPGEF1-206ENST00000438647 ZKSCAN3Q9BRR0 538 aa29.07■■■□□ 2.24
RAPGEF1-206ENST00000438647 RAVER2Q9HCJ3 691 aaKnown RBP29.07■■■□□ 2.24
RAPGEF1-206ENST00000438647 FLRT1Q9NZU1 646 aa29.07■■■□□ 2.24
RAPGEF1-206ENST00000438647 COBLO75128 1261 aa29.06■■■□□ 2.24
RAPGEF1-206ENST00000438647 CENPBP07199 599 aaPredicted RBP29.06■■■□□ 2.24
RAPGEF1-206ENST00000438647 ZSCAN10Q96SZ4 725 aaPredicted RBP29.06■■■□□ 2.24
RAPGEF1-206ENST00000438647 CRISPLD2Q9H0B8 497 aa29.06■■■□□ 2.24
RAPGEF1-206ENST00000438647 ZSWIM5Q9P217 1185 aa29.06■■■□□ 2.24
RAPGEF1-206ENST00000438647 FBXO40Q9UH90 709 aa29.06■■■□□ 2.24
RAPGEF1-206ENST00000438647 MAP4K1Q92918 833 aa29.05■■■□□ 2.24
RAPGEF1-206ENST00000438647 UBAC1Q9BSL1 405 aa29.05■■■□□ 2.24
RAPGEF1-206ENST00000438647 CYP21A2P08686 494 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 PDHBP11177 359 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 SLC4A3P48751 1232 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 RASGRP2Q7LDG7 609 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 SKAP1Q86WV1 359 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 CHST13Q8NET6 341 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 PRR12Q9ULL5 1215 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 DIS3Q9Y2L1 958 aaKnown RBP29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 RIPK3Q9Y572 518 aa29.04■■■□□ 2.24
RAPGEF1-206ENST00000438647 FARP2O94887 1054 aaPredicted RBP29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 BTNL9Q6UXG8 535 aa29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 ANKLE1Q8NAG6 615 aa29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 ANKS1AQ92625 1134 aa29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 MAML3Q96JK9 1138 aa29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 KAT14Q9H8E8 782 aa29.03■■■□□ 2.24
RAPGEF1-206ENST00000438647 TNKSO95271 1327 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 SNHG28P0DPA3 235 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 CYP2C19P33261 490 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 CASC1Q6TDU7 716 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 PNMA1Q8ND90 353 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 DDX11Q96FC9 970 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 ESYT1Q9BSJ8 1104 aa29.02■■■□□ 2.24
RAPGEF1-206ENST00000438647 FRMPD2Q68DX3 1309 aaPredicted RBP29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 IGHA2P01877 340 aa29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 CCND3P30281 292 aaPredicted RBP29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 ZNF543Q08ER8 600 aa29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 TKFCQ3LXA3 575 aa29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 GPATCH4Q5T3I0 446 aaKnown RBP29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 SYDE2Q5VT97 1194 aa29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 UBE2Q1Q7Z7E8 422 aa29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 RALYLQ86SE5 291 aaKnown RBP29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 ENAHQ8N8S7 591 aaPredicted RBP29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 GPCPD1Q9NPB8 672 aa29.01■■■□□ 2.23
RAPGEF1-206ENST00000438647 MSCO60682 206 aa29■■■□□ 2.23
RAPGEF1-206ENST00000438647 PGK2P07205 417 aa29■■■□□ 2.23
RAPGEF1-206ENST00000438647 ANKRD35Q8N283 1001 aa29■■■□□ 2.23
RAPGEF1-206ENST00000438647 OGDHLQ9ULD0 1010 aa29■■■□□ 2.23
RAPGEF1-206ENST00000438647 RBM8AQ9Y5S9 174 aaKnown RBP29■■■□□ 2.23
RAPGEF1-206ENST00000438647 ZNF536O15090 1300 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms