RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 ICA1Q05084 483 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 KIAA1755Q5JYT7 1200 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 SPICE1Q8N0Z3 855 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 NECAB3Q96P71 396 aaPredicted RBP18.16■□□□□ 0.5
NELFE-204ENST00000436289 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 PCDHA11Q9Y5I1 949 aa18.16■□□□□ 0.5
NELFE-204ENST00000436289 CABYRO75952 493 aa18.15■□□□□ 0.5
NELFE-204ENST00000436289 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
NELFE-204ENST00000436289 POLA2Q14181 598 aa18.15■□□□□ 0.5
NELFE-204ENST00000436289 TTF1Q15361 905 aaPredicted RBP18.15■□□□□ 0.5
NELFE-204ENST00000436289 PPP2R2DQ66LE6 453 aa18.15■□□□□ 0.5
NELFE-204ENST00000436289 SIAH1Q8IUQ4 282 aa18.15■□□□□ 0.5
NELFE-204ENST00000436289 PPP1R12CQ9BZL4 782 aa18.15■□□□□ 0.5
NELFE-204ENST00000436289 UPF3AQ9H1J1 476 aaKnown RBP18.15■□□□□ 0.5
NELFE-204ENST00000436289 PPP1R9AQ9ULJ8 1098 aa18.15■□□□□ 0.5
NELFE-204ENST00000436289 SURF6O75683 361 aaKnown RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 CD4P01730 458 aa18.14■□□□□ 0.49
NELFE-204ENST00000436289 NKX3-2P78367 333 aa18.14■□□□□ 0.49
NELFE-204ENST00000436289 ACVR2BQ13705 512 aa18.14■□□□□ 0.49
NELFE-204ENST00000436289 SKIV2LQ15477 1246 aaKnown RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 SAMD1Q6SPF0 538 aaPredicted RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 LENG1Q96BZ8 264 aaPredicted RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 KANSL2Q9H9L4 492 aa18.14■□□□□ 0.49
NELFE-204ENST00000436289 GOPCQ9HD26 462 aa18.14■□□□□ 0.49
NELFE-204ENST00000436289 DBNLQ9UJU6 430 aaKnown RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 ZHX1Q9UKY1 873 aaPredicted RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 ZNF214Q9UL59 606 aaPredicted RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
NELFE-204ENST00000436289 SLC4A7Q9Y6M7 1214 aa18.14■□□□□ 0.49
NELFE-204ENST00000436289 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
NELFE-204ENST00000436289 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
NELFE-204ENST00000436289 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
NELFE-204ENST00000436289 HIPK3Q9H422 1215 aa18.13■□□□□ 0.49
NELFE-204ENST00000436289 EPHX3Q9H6B9 360 aa18.13■□□□□ 0.49
NELFE-204ENST00000436289 NOP58Q9Y2X3 529 aaKnown RBP18.13■□□□□ 0.49
NELFE-204ENST00000436289 DNAJC25-GNG10A0A024R161 153 aa18.12■□□□□ 0.49
NELFE-204ENST00000436289 CYP2C18P33260 490 aa18.12■□□□□ 0.49
NELFE-204ENST00000436289 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
NELFE-204ENST00000436289 TFF2Q03403 129 aa18.12■□□□□ 0.49
NELFE-204ENST00000436289 OTOP2Q7RTS6 562 aa18.12■□□□□ 0.49
NELFE-204ENST00000436289 MICALL1Q8N3F8 863 aa18.12■□□□□ 0.49
NELFE-204ENST00000436289 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
NELFE-204ENST00000436289 TCF20Q9UGU0 1960 aaKnown RBP18.11■□□□□ 0.49
NELFE-204ENST00000436289 CHD7Q9P2D1 2997 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 PFKMP08237 780 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 KCNQ1P51787 676 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 CCDC144BQ3MJ40 725 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 SLC43A3Q8NBI5 491 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 REPS2Q8NFH8 660 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.11■□□□□ 0.49
NELFE-204ENST00000436289 MUC6Q6W4X9 2439 aa18.11■□□□□ 0.49
NELFE-204ENST00000436289 MYO5AQ9Y4I1 1855 aaKnown RBP18.1■□□□□ 0.49
NELFE-204ENST00000436289 MYADML2A6NDP7 307 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 ATP2A1O14983 1001 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 TLL1O43897 1013 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 SLC9C2Q5TAH2 1124 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.49
NELFE-204ENST00000436289 EAF2Q96CJ1 260 aaPredicted RBP18.1■□□□□ 0.49
NELFE-204ENST00000436289 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
NELFE-204ENST00000436289 ATP8A2Q9NTI2 1148 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 FBXO40Q9UH90 709 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 MTCH2Q9Y6C9 303 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 XIRP2A4UGR9 3374 aa18.1■□□□□ 0.49
NELFE-204ENST00000436289 ZEB2O60315 1214 aa18.09■□□□□ 0.49
NELFE-204ENST00000436289 EEF2P13639 858 aaKnown RBP18.09■□□□□ 0.49
NELFE-204ENST00000436289 AKR1B1P15121 316 aa18.09■□□□□ 0.49
NELFE-204ENST00000436289 ATP2A2P16615 1042 aaKnown RBP18.09■□□□□ 0.49
NELFE-204ENST00000436289 TMEM67Q5HYA8 995 aa18.09■□□□□ 0.49
NELFE-204ENST00000436289 HLA-CQ95604 372 aa18.09■□□□□ 0.49
NELFE-204ENST00000436289 ANTXR1Q9H6X2 564 aa18.09■□□□□ 0.49
NELFE-204ENST00000436289 FBXO28Q9NVF7 368 aa18.09■□□□□ 0.49
NELFE-204ENST00000436289 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
NELFE-204ENST00000436289 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
NELFE-204ENST00000436289 SLF1Q9BQI6 1058 aa18.08■□□□□ 0.48
NELFE-204ENST00000436289 PRRC2BQ5JSZ5 2229 aaKnown RBP18.07■□□□□ 0.48
NELFE-204ENST00000436289 TRIM27P14373 513 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 PDE6AP16499 860 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 RABGGTBP53611 331 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 ANKRD35Q8N283 1001 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 PHOSPHO2Q8TCD6 241 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 NOC4LQ9BVI4 516 aaKnown RBP18.07■□□□□ 0.48
NELFE-204ENST00000436289 TLR7Q9NYK1 1049 aaKnown RBP18.07■□□□□ 0.48
NELFE-204ENST00000436289 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
NELFE-204ENST00000436289 TRANK1O15050 2925 aa18.07■□□□□ 0.48
NELFE-204ENST00000436289 PI4K2BG5E9Z4 385 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 ZBED4O75132 1171 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 SUPT20HL2P0C7V6 817 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 CDK8P49336 464 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 FAM83BQ5T0W9 1011 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 CHST13Q8NET6 341 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 SDR42E1Q8WUS8 393 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
NELFE-204ENST00000436289 ZBBXA8MT70 800 aa18.05■□□□□ 0.48
NELFE-204ENST00000436289 KIF28PB7ZC32 967 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms