RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 NEDD1Q8NHV4 660 aa25.95■■□□□ 1.74
RPUSD3-206ENST00000433535 MKL1Q969V6 931 aa25.95■■□□□ 1.74
RPUSD3-206ENST00000433535 TINF2Q9BSI4 451 aa25.95■■□□□ 1.74
RPUSD3-206ENST00000433535 TAL1P17542 331 aaPredicted RBP25.94■■□□□ 1.74
RPUSD3-206ENST00000433535 TFAP4Q01664 338 aa25.94■■□□□ 1.74
RPUSD3-206ENST00000433535 GMCL1P1Q8NEA9 526 aa25.94■■□□□ 1.74
RPUSD3-206ENST00000433535 RAVER2Q9HCJ3 691 aaKnown RBP25.94■■□□□ 1.74
RPUSD3-206ENST00000433535 DIS3Q9Y2L1 958 aaKnown RBP25.94■■□□□ 1.74
RPUSD3-206ENST00000433535 SMCHD1A6NHR9 2005 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 LTBP2Q14767 1821 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 PDE1AP54750 535 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 CTDSPL2Q05D32 466 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 HDAC1Q13547 482 aaPredicted RBP25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 LRRC41Q15345 812 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 VPS53Q5VIR6 699 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 SLFN13Q68D06 897 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 LENG1Q96BZ8 264 aaPredicted RBP25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 CHMP4CQ96CF2 233 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 ISY1Q9ULR0 285 aaKnown RBP25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 SYNPO2Q9UMS6 1093 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 ATP11BQ9Y2G3 1177 aa25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 CTDP1Q9Y5B0 961 aaPredicted RBP25.93■■□□□ 1.74
RPUSD3-206ENST00000433535 ZBED4O75132 1171 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 FERMT2Q96AC1 680 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 EVI5LQ96CN4 794 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 SLC38A10Q9HBR0 1119 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 XPNPEP3Q9NQH7 507 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 INCENPQ9NQS7 918 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 NRBP1Q9UHY1 535 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 FEM1BQ9UK73 627 aa25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.92■■□□□ 1.74
RPUSD3-206ENST00000433535 ATP2A1O14983 1001 aa25.91■■□□□ 1.74
RPUSD3-206ENST00000433535 RARBP10826 455 aa25.91■■□□□ 1.74
RPUSD3-206ENST00000433535 ADCYAP1R1P41586 468 aa25.91■■□□□ 1.74
RPUSD3-206ENST00000433535 PGK1P00558 417 aa25.9■■□□□ 1.74
RPUSD3-206ENST00000433535 ZNF865P0CJ78 1059 aaPredicted RBP25.9■■□□□ 1.74
RPUSD3-206ENST00000433535 BMP3P12645 472 aa25.9■■□□□ 1.74
RPUSD3-206ENST00000433535 SLC39A5Q6ZMH5 540 aa25.9■■□□□ 1.74
RPUSD3-206ENST00000433535 DDX11Q96FC9 970 aa25.9■■□□□ 1.74
RPUSD3-206ENST00000433535 TACC3Q9Y6A5 838 aa25.9■■□□□ 1.74
RPUSD3-206ENST00000433535 DNAJC25-GNG10A0A024R161 153 aa25.89■■□□□ 1.74
RPUSD3-206ENST00000433535 NMT2O60551 498 aa25.89■■□□□ 1.74
RPUSD3-206ENST00000433535 TRIM60Q495X7 471 aa25.89■■□□□ 1.74
RPUSD3-206ENST00000433535 RASGRP2Q7LDG7 609 aa25.89■■□□□ 1.74
RPUSD3-206ENST00000433535 FAM227BQ96M60 508 aa25.89■■□□□ 1.74
RPUSD3-206ENST00000433535 CNPY2Q9Y2B0 182 aa25.89■■□□□ 1.74
RPUSD3-206ENST00000433535 A0A0D9SFI3 127 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 TSPY2A6NKD2 308 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 TMEM232C9JQI7 657 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 SNX17Q15036 470 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 LRIT3Q3SXY7 679 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 LBHD1Q9BQE6 289 aaPredicted RBP25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 LNPKQ9C0E8 428 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 IL17RBQ9NRM6 502 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 HOMER2Q9NSB8 354 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 PRKAG2Q9UGJ0 569 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 STX8Q9UNK0 236 aa25.88■■□□□ 1.73
RPUSD3-206ENST00000433535 AKR1A1P14550 325 aa25.87■■□□□ 1.73
RPUSD3-206ENST00000433535 STAT2P52630 851 aa25.87■■□□□ 1.73
RPUSD3-206ENST00000433535 PRDM5Q9NQX1 630 aaPredicted RBP25.87■■□□□ 1.73
RPUSD3-206ENST00000433535 PHF24Q9UPV7 400 aa25.87■■□□□ 1.73
RPUSD3-206ENST00000433535 MCM3APO60318 1980 aa25.87■■□□□ 1.73
RPUSD3-206ENST00000433535 SYNGAP1Q96PV0 1343 aa25.87■■□□□ 1.73
RPUSD3-206ENST00000433535 SNAI1O95863 264 aaPredicted RBP25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 MCCP23508 829 aa25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 SLC1A4P43007 532 aa25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 OAZ1P54368 228 aa25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 IKQ13123 557 aaPredicted RBP25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 ANKRD35Q8N283 1001 aa25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 MSL3Q8N5Y2 521 aaKnown RBP25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 GMCL1Q96IK5 515 aa25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 HELLSQ9NRZ9 838 aa25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 ZHX1Q9UKY1 873 aaPredicted RBP25.86■■□□□ 1.73
RPUSD3-206ENST00000433535 RANBP6O60518 1105 aaKnown RBP25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 MAMDC4Q6UXC1 1216 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 KCTD1Q719H9 257 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 RNF180Q86T96 592 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 CHST13Q8NET6 341 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 FGD4Q96M96 766 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 ANAPC4Q9UJX5 808 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 MTMR7Q9Y216 660 aa25.85■■□□□ 1.73
RPUSD3-206ENST00000433535 Q7L0L9 218 aa25.84■■□□□ 1.73
RPUSD3-206ENST00000433535 FBXO40Q9UH90 709 aa25.84■■□□□ 1.73
RPUSD3-206ENST00000433535 ZNF536O15090 1300 aa25.84■■□□□ 1.73
RPUSD3-206ENST00000433535 SYNRGQ9UMZ2 1314 aa25.84■■□□□ 1.73
RPUSD3-206ENST00000433535 DNAH12Q6ZR08 3092 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 ADAMTS4O75173 837 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 NMIQ13287 307 aaPredicted RBP25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 ZNF589Q86UQ0 364 aaPredicted RBP25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 FAM160B2Q86V87 743 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 STAG1Q8WVM7 1258 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 PDLIM7Q9NR12 457 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 TOMM22Q9NS69 142 aa25.83■■□□□ 1.73
RPUSD3-206ENST00000433535 A0A1W2PQ45 241 aaPredicted RBP25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 A0A1W2PQY0 241 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 TRIM6-TRIM34B2RNG4 842 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 SNAP25P60880 206 aa25.82■■□□□ 1.72
RPUSD3-206ENST00000433535 ALX1Q15699 326 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms