RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 CTR9Q6PD62 1173 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 AMOTL1Q8IY63 956 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 MB21D1Q8N884 522 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 KBTBD3Q8NAB2 608 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 MOV10L1Q9BXT6 1211 aaKnown RBP11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SH2D4AQ9H788 454 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ARHGEF10LQ9HCE6 1279 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 HRO43593 1189 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 NBR1Q14596 966 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 C7orf61Q8IZ16 206 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 NPLOC4Q8TAT6 608 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GDF15Q99988 308 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
CDC42-IT1-201ENST00000431803 STRNO43815 780 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 FLOT1O75955 427 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ERCC3P19447 782 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ADORA2AP29274 412 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 SBK1Q52WX2 424 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GIMAP6Q6P9H5 292 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ADAMTS5Q9UNA0 930 aa11.29□□□□□ -0.6
CDC42-IT1-201ENST00000431803 A0A0C4DFX4 3053 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 MSCO60682 206 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ZFYP08048 801 aaPredicted RBP11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CYBAP13498 195 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 CYP2C19P33261 490 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 BMP8BP34820 402 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 TRPV1Q8NER1 839 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 APPBP2Q92624 585 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 MROH8Q9H579 483 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 DDX20Q9UHI6 824 aaKnown RBP11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
CDC42-IT1-201ENST00000431803 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 RNF113AO15541 343 aaKnown RBP11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 GPAA1O43292 621 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 COBLO75128 1261 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 RASA1P20936 1047 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 LRRC26Q2I0M4 334 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 DPP9Q86TI2 863 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SLC4A5Q9BY07 1137 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TTC41PQ6P2S7 1318 aa11.27□□□□□ -0.61
CDC42-IT1-201ENST00000431803 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 M0R2C6 588 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 DNM1LO00429 736 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 VWA5AO00534 786 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 GNAT2P19087 354 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 COL9A1P20849 921 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MAGEA10P43363 369 aaPredicted RBP11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PLS1Q14651 629 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 NCAPG2Q86XI2 1143 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ZNF214Q9UL59 606 aaPredicted RBP11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
CDC42-IT1-201ENST00000431803 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SOX1O00570 391 aaPredicted RBP11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SLC25A27O95847 323 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 FCER1AP12319 257 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SYN1P17600 705 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 CNGA1P29973 690 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 OTUD7AQ8TE49 926 aaPredicted RBP11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MAML3Q96JK9 1138 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms