RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
HDAC6-207ENST00000430858 MCCP23508 829 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 OAZ1P54368 228 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 TRIM32Q13049 653 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 CCL14Q16627 93 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 CCDC178Q5BJE1 867 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 MFSD14CQ5VZR4 134 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 RCSD1Q6JBY9 416 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 IQCA1Q86XH1 822 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 DEFB118Q96PH6 123 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 TMEM47Q9BQJ4 181 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 CNNM2Q9H8M5 875 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 ISY1Q9ULR0 285 aaKnown RBP11.57□□□□□ -0.56
HDAC6-207ENST00000430858 PLXNB2O15031 1838 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 NEDD4P46934 1319 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 BRCA2P51587 3418 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 SGSM2O43147 1006 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 TFRCP02786 760 aaKnown RBP11.56□□□□□ -0.56
HDAC6-207ENST00000430858 NEFLP07196 543 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 CACNB2Q08289 660 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-207ENST00000430858 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-207ENST00000430858 KCTD2Q14681 263 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 OLFML2BQ68BL8 750 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
HDAC6-207ENST00000430858 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 CPXCR1Q8N123 301 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 DCAF4Q8WV16 495 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 MMP19Q99542 508 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 KRT23Q9C075 422 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 FLRT1Q9NZU1 646 aa11.56□□□□□ -0.56
HDAC6-207ENST00000430858 MYH4Q9Y623 1939 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 COBLO75128 1261 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 KDM4AO75164 1064 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 IGHA2P01877 340 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 CCDC96Q2M329 555 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 BMP2KLQ5H9B9 411 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 KCTD1Q719H9 257 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 RAVER2Q9HCJ3 691 aaKnown RBP11.55□□□□□ -0.56
HDAC6-207ENST00000430858 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
HDAC6-207ENST00000430858 DIS3Q9Y2L1 958 aaKnown RBP11.55□□□□□ -0.56
HDAC6-207ENST00000430858 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-207ENST00000430858 PARP14Q460N5 1801 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 B4E1Z4 1266 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 FARP2O94887 1054 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-207ENST00000430858 PDHBP11177 359 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 PTH1RQ03431 593 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 BTNL9Q6UXG8 535 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC6-207ENST00000430858 UBE2Q1Q7Z7E8 422 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 ANKLE1Q8NAG6 615 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 CHST13Q8NET6 341 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 ANKS1AQ92625 1134 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 CHMP4CQ96CF2 233 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 FBXO40Q9UH90 709 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 PRR12Q9ULL5 1215 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 RIPK3Q9Y572 518 aa11.54□□□□□ -0.56
HDAC6-207ENST00000430858 ZNF236Q9UL36 1845 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 MSCO60682 206 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 CCND3P30281 292 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-207ENST00000430858 CYP2C19P33261 490 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 SLC4A3P48751 1232 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 TRDNQ13061 729 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 ZNF792Q3KQV3 632 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 KIAA1211Q6ZU35 1233 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 MAP4K1Q92918 833 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 DDX11Q96FC9 970 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 MAML3Q96JK9 1138 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-207ENST00000430858 ZKSCAN3Q9BRR0 538 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 OGDHLQ9ULD0 1010 aa11.53□□□□□ -0.56
HDAC6-207ENST00000430858 PGK2P07205 417 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 CYP21A2P08686 494 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 SNHG28P0DPA3 235 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 CYBAP13498 195 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.57
HDAC6-207ENST00000430858 SYDE2Q5VT97 1194 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.57
HDAC6-207ENST00000430858 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 RASGRP2Q7LDG7 609 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 HTATIP2Q9BUP3 242 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 KAT14Q9H8E8 782 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 ZNF536O15090 1300 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 TNKSO95271 1327 aa11.52□□□□□ -0.57
HDAC6-207ENST00000430858 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-207ENST00000430858 LAMA4Q16363 1823 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 CNGA1P29973 690 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 SLC16A2P36021 539 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 LHX8Q68G74 356 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms