RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	SYNPO2	Q9UMS6	1093 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	SLC25A27	O95847	323 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	NDUFB10	O96000	172 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	PDE4B	Q07343	736 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	SNX17	Q15036	470 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	NCAPG2	Q86XI2	1143 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	RIOX2	Q8IUF8	465 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	CDX2	Q99626	313 aa	Predicted RBP	21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	LNPK	Q9C0E8	428 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	SEMA6B	Q9H3T3	888 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	RWDD1	Q9H446	243 aa	Predicted RBP	21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	CLIP2	Q9UDT6	1046 aa		21.1	■□□□□ 0.97
MRPL28-203	ENST00000429738	LTBP2	Q14767	1821 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	PRAMEF19	Q5SWL8	479 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	C9orf50	Q5SZB4	431 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	SAMD1	Q6SPF0	538 aa	Predicted RBP	21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	BAD	Q92934	168 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	NUP88	Q99567	741 aa	Predicted RBP	21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	PRDM5	Q9NQX1	630 aa	Predicted RBP	21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	HELLS	Q9NRZ9	838 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	PLXNA1	Q9UIW2	1896 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	SMCHD1	A6NHR9	2005 aa		21.09	■□□□□ 0.97
MRPL28-203	ENST00000429738	RAD21	O60216	631 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	TTLL1	O95922	423 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	IGHD	P01880	384 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	MYCN	P04198	464 aa	Predicted RBP	21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	SLC3A2	P08195	630 aa	Known RBP	21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	ADCYAP1R1	P41586	468 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	TRIM60	Q495X7	471 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	VPS53	Q5VIR6	699 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	C1orf53	Q5VUE5	145 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	GMCL1P1	Q8NEA9	526 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	EXOC6	Q8TAG9	804 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	SLF1	Q9BQI6	1058 aa		21.08	■□□□□ 0.97
MRPL28-203	ENST00000429738	TSPY3	P0CV98	308 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738	TSPY8	P0CW00	308 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738	FCER1A	P12319	257 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738	STAT3	P40763	770 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738	LRRC41	Q15345	812 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738	ALX1	Q15699	326 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738	ANAPC4	Q9UJX5	808 aa		21.07	■□□□□ 0.96
MRPL28-203	ENST00000429738		A0A0D9SFI3	127 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	COPB2	P35606	906 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	SMAD3	P84022	425 aa	Known RBP	21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	TFAP4	Q01664	338 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	FAM47A	Q5JRC9	791 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	PRPF38A	Q8NAV1	312 aa	Known RBP	21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	FERMT2	Q96AC1	680 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	MAML3	Q96JK9	1138 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	FAM227B	Q96M60	508 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	OSBPL3	Q9H4L5	887 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	PDLIM7	Q9NR12	457 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	TACC3	Q9Y6A5	838 aa		21.06	■□□□□ 0.96
MRPL28-203	ENST00000429738	TRIM43B	A6NCK2	446 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	ATP2A1	O14983	1001 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	FGR	P09769	529 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	NUCB1	Q02818	461 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	CTDSPL2	Q05D32	466 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	MCMDC2	Q4G0Z9	681 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	SH3RF1	Q7Z6J0	888 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	CHD1L	Q86WJ1	897 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	LRRC47	Q8N1G4	583 aa	Known RBP	21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	TRIM43	Q96BQ3	446 aa	Predicted RBP	21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	NRBP1	Q9UHY1	535 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	VCAN	P13611	3396 aa		21.05	■□□□□ 0.96
MRPL28-203	ENST00000429738	TLE2	Q04725	743 aa		21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	B4GALNT3	Q6L9W6	998 aa		21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	PLEKHM2	Q8IWE5	1019 aa		21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	MAFA	Q8NHW3	353 aa	Predicted RBP	21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	MMP19	Q99542	508 aa		21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	TEX13B	Q9BXU2	312 aa		21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	DIS3	Q9Y2L1	958 aa	Known RBP	21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	ZMYM6	O95789	1325 aa		21.04	■□□□□ 0.96
MRPL28-203	ENST00000429738	NOV	P48745	357 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	ZNF792	Q3KQV3	632 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	ZNF589	Q86UQ0	364 aa	Predicted RBP	21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	TTYH1	Q9H313	450 aa	Predicted RBP	21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	SLC38A10	Q9HBR0	1119 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	INCENP	Q9NQS7	918 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	IL17RB	Q9NRM6	502 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	FEM1B	Q9UK73	627 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	PHF24	Q9UPV7	400 aa		21.03	■□□□□ 0.96
MRPL28-203	ENST00000429738	ORC4	O43929	436 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	FGA	P02671	866 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	HSPD1	P10809	573 aa	Known RBP	21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	RARB	P10826	455 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	NMI	Q13287	307 aa	Predicted RBP	21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	KCTD2	Q14681	263 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	PPP4R3B	Q5MIZ7	849 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	SLFN13	Q68D06	897 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	SNRNP48	Q6IEG0	339 aa	Known RBP	21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	XPNPEP3	Q9NQH7	507 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	RIPK3	Q9Y572	518 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	TTC28	Q96AY4	2481 aa		21.02	■□□□□ 0.96
MRPL28-203	ENST00000429738	EYS	Q5T1H1	3165 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	TSPY2	A6NKD2	308 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	TRIM6-TRIM34	B2RNG4	842 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	PGK2	P07205	417 aa		21.01	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms