RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 SNRNP48Q6IEG0 339 aaKnown RBP32.35■■■□□ 2.77
LMO1-202ENST00000428101 B4GALNT3Q6L9W6 998 aa32.35■■■□□ 2.77
LMO1-202ENST00000428101 EXOC6Q8TAG9 804 aa32.35■■■□□ 2.77
LMO1-202ENST00000428101 GDF15Q99988 308 aa32.35■■■□□ 2.77
LMO1-202ENST00000428101 ANAPC4Q9UJX5 808 aa32.35■■■□□ 2.77
LMO1-202ENST00000428101 FEM1BQ9UK73 627 aa32.35■■■□□ 2.77
LMO1-202ENST00000428101 DIS3Q9Y2L1 958 aaKnown RBP32.35■■■□□ 2.77
LMO1-202ENST00000428101 LAMA3Q16787 3333 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 ATP2A1O14983 1001 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 SYN1P17600 705 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 ALX1Q15699 326 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 ANO1Q5XXA6 986 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 TICAM2Q86XR7 235 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 KIFC2Q96AC6 838 aa32.34■■■□□ 2.77
LMO1-202ENST00000428101 SENP6Q9GZR1 1112 aaPredicted RBP32.34■■■□□ 2.77
LMO1-202ENST00000428101 DNM1LO00429 736 aa32.33■■■□□ 2.77
LMO1-202ENST00000428101 MCMDC2Q4G0Z9 681 aa32.33■■■□□ 2.77
LMO1-202ENST00000428101 SLC38A10Q9HBR0 1119 aa32.33■■■□□ 2.77
LMO1-202ENST00000428101 IL17RBQ9NRM6 502 aa32.33■■■□□ 2.77
LMO1-202ENST00000428101 ZBED4O75132 1171 aa32.32■■■□□ 2.76
LMO1-202ENST00000428101 CPXCR1Q8N123 301 aa32.32■■■□□ 2.76
LMO1-202ENST00000428101 A0A1W2PPC1 479 aa32.31■■■□□ 2.76
LMO1-202ENST00000428101 BMP3P12645 472 aa32.31■■■□□ 2.76
LMO1-202ENST00000428101 GJC2Q5T442 439 aaPredicted RBP32.31■■■□□ 2.76
LMO1-202ENST00000428101 CHD1LQ86WJ1 897 aa32.31■■■□□ 2.76
LMO1-202ENST00000428101 TINF2Q9BSI4 451 aa32.31■■■□□ 2.76
LMO1-202ENST00000428101 RAVER2Q9HCJ3 691 aaKnown RBP32.31■■■□□ 2.76
LMO1-202ENST00000428101 TSPY2A6NKD2 308 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 TRIM6-TRIM34B2RNG4 842 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 NMT2O60551 498 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 FGAP02671 866 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 BMP8BP34820 402 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 NUCB1Q02818 461 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 NMIQ13287 307 aaPredicted RBP32.3■■■□□ 2.76
LMO1-202ENST00000428101 ZNF589Q86UQ0 364 aaPredicted RBP32.3■■■□□ 2.76
LMO1-202ENST00000428101 NRBP1Q9UHY1 535 aa32.3■■■□□ 2.76
LMO1-202ENST00000428101 FGRP09769 529 aa32.29■■■□□ 2.76
LMO1-202ENST00000428101 PLEKHM2Q8IWE5 1019 aa32.29■■■□□ 2.76
LMO1-202ENST00000428101 ARRDC4Q8NCT1 418 aa32.29■■■□□ 2.76
LMO1-202ENST00000428101 GMCL1Q96IK5 515 aa32.29■■■□□ 2.76
LMO1-202ENST00000428101 ORC4O43929 436 aa32.28■■■□□ 2.76
LMO1-202ENST00000428101 HSPD1P10809 573 aaKnown RBP32.28■■■□□ 2.76
LMO1-202ENST00000428101 TAL1P17542 331 aaPredicted RBP32.28■■■□□ 2.76
LMO1-202ENST00000428101 MAGEA10P43363 369 aaPredicted RBP32.28■■■□□ 2.76
LMO1-202ENST00000428101 SLC4A3P48751 1232 aa32.28■■■□□ 2.76
LMO1-202ENST00000428101 RILPL2Q969X0 211 aa32.28■■■□□ 2.76
LMO1-202ENST00000428101 OSBPL3Q9H4L5 887 aa32.28■■■□□ 2.76
LMO1-202ENST00000428101 STX8Q9UNK0 236 aa32.28■■■□□ 2.76
LMO1-202ENST00000428101 CTDP1Q9Y5B0 961 aaPredicted RBP32.28■■■□□ 2.76
LMO1-202ENST00000428101 DNAJC25-GNG10A0A024R161 153 aa32.27■■■□□ 2.76
LMO1-202ENST00000428101 TMEM232C9JQI7 657 aa32.27■■■□□ 2.76
LMO1-202ENST00000428101 RANBP6O60518 1105 aaKnown RBP32.27■■■□□ 2.76
LMO1-202ENST00000428101 NOVP48745 357 aa32.27■■■□□ 2.76
LMO1-202ENST00000428101 PPP4R3BQ5MIZ7 849 aa32.27■■■□□ 2.76
LMO1-202ENST00000428101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.27■■■□□ 2.76
LMO1-202ENST00000428101 MCCP23508 829 aa32.26■■■□□ 2.75
LMO1-202ENST00000428101 ATN1P54259 1190 aaPredicted RBP32.26■■■□□ 2.75
LMO1-202ENST00000428101 OAZ1P54368 228 aa32.26■■■□□ 2.75
LMO1-202ENST00000428101 CHMP4CQ96CF2 233 aa32.26■■■□□ 2.75
LMO1-202ENST00000428101 ZNF865P0CJ78 1059 aaPredicted RBP32.25■■■□□ 2.75
LMO1-202ENST00000428101 SLC1A4P43007 532 aa32.25■■■□□ 2.75
LMO1-202ENST00000428101 STAT2P52630 851 aa32.25■■■□□ 2.75
LMO1-202ENST00000428101 LRRC41Q15345 812 aa32.25■■■□□ 2.75
LMO1-202ENST00000428101 STAG1Q8WVM7 1258 aa32.25■■■□□ 2.75
LMO1-202ENST00000428101 DDX11Q96FC9 970 aa32.25■■■□□ 2.75
LMO1-202ENST00000428101 MSL3Q8N5Y2 521 aaKnown RBP32.24■■■□□ 2.75
LMO1-202ENST00000428101 ZMYM6O95789 1325 aa32.24■■■□□ 2.75
LMO1-202ENST00000428101 CCDC171Q6TFL3 1326 aa32.24■■■□□ 2.75
LMO1-202ENST00000428101 KBTBD13C9JR72 458 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 FDX1P10109 184 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 SDSP20132 328 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 RASGRP2Q7LDG7 609 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 FAM160B2Q86V87 743 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 CHST13Q8NET6 341 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 CHURC1Q8WUH1 139 aa32.23■■■□□ 2.75
LMO1-202ENST00000428101 ISY1Q9ULR0 285 aaKnown RBP32.23■■■□□ 2.75
LMO1-202ENST00000428101 SOX1O00570 391 aaPredicted RBP32.22■■■□□ 2.75
LMO1-202ENST00000428101 PLA2G6O60733 806 aa32.22■■■□□ 2.75
LMO1-202ENST00000428101 MYCNP04198 464 aaPredicted RBP32.22■■■□□ 2.75
LMO1-202ENST00000428101 RCSD1Q6JBY9 416 aa32.22■■■□□ 2.75
LMO1-202ENST00000428101 MAMDC4Q6UXC1 1216 aa32.22■■■□□ 2.75
LMO1-202ENST00000428101 KCTD1Q719H9 257 aa32.22■■■□□ 2.75
LMO1-202ENST00000428101 ZNF536O15090 1300 aa32.22■■■□□ 2.75
LMO1-202ENST00000428101 MCM3APO60318 1980 aa32.21■■■□□ 2.75
LMO1-202ENST00000428101 SNAI1O95863 264 aaPredicted RBP32.21■■■□□ 2.75
LMO1-202ENST00000428101 RARBP10826 455 aa32.21■■■□□ 2.75
LMO1-202ENST00000428101 FGD4Q96M96 766 aa32.21■■■□□ 2.75
LMO1-202ENST00000428101 FBXO40Q9UH90 709 aa32.21■■■□□ 2.75
LMO1-202ENST00000428101 SYNGAP1Q96PV0 1343 aa32.21■■■□□ 2.75
LMO1-202ENST00000428101 RTP1P59025 263 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 HAND2P61296 217 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 RRP12Q5JTH9 1297 aaKnown RBP32.2■■■□□ 2.75
LMO1-202ENST00000428101 SLC39A5Q6ZMH5 540 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 ZNF467Q7Z7K2 595 aaPredicted RBP32.2■■■□□ 2.75
LMO1-202ENST00000428101 ANKRD35Q8N283 1001 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 XPNPEP3Q9NQH7 507 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 TOMM22Q9NS69 142 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 CNPY2Q9Y2B0 182 aa32.2■■■□□ 2.75
LMO1-202ENST00000428101 SUPT16HQ9Y5B9 1047 aaKnown RBP32.2■■■□□ 2.75
LMO1-202ENST00000428101 ADCYAP1R1P41586 468 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms