RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 NKX2-4Q9H2Z4 354 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 XPNPEP3Q9NQH7 507 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 FLT1P17948 1338 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PDS5AQ29RF7 1337 aaKnown RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SCN5AQ14524 2016 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 A0A0G2JMZ2 1700 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 LRRC37A2A6NM11 1700 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 A0A1W2PQ45 241 aaPredicted RBP9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 A0A1W2PQY0 241 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 BAG3O95817 575 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TIMP1P01033 207 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CSF2RAP15509 400 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ZNF365Q70YC5 407 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 NCAPG2Q86XI2 1143 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 COPRSQ9NQ92 184 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 AKAP2Q9Y2D5 859 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PTPRCP08575 1304 aa9.2□□□□□ -0.94
HLA-DQA1-204ENST00000422863 FAM86C2PA6NEL3 165 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 DCDC2CA8MYV0 355 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 RFXAPO00287 272 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 HLA-DOAP06340 250 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 RARBP10826 455 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 RABGGTBP53611 331 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SKIV2LQ15477 1246 aaKnown RBP9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CERKLQ49MI3 558 aaPredicted RBP9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 LBX2Q6XYB7 198 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 RNF180Q86T96 592 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MAML3Q96JK9 1138 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 KIAA1683Q9H0B3 1180 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 GINM1Q9NU53 330 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MSRAQ9UJ68 235 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 YBX2Q9Y2T7 364 aaKnown RBP9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 HCN4Q9Y3Q4 1203 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 NAV1Q8NEY1 1877 aa9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 BAZ2AQ9UIF9 1905 aaKnown RBP9.19□□□□□ -0.94
HLA-DQA1-204ENST00000422863 APBB1O00213 710 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 STRNO43815 780 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PGK2P07205 417 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MYOGP15173 224 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 USP14P54578 494 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PPP4CP60510 307 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 COG2Q14746 738 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 KCNA10Q16322 511 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ABCB5Q2M3G0 1257 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 KIAA1755Q5JYT7 1200 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 VTI1AQ96AJ9 217 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TANGO6Q9C0B7 1094 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MRS2Q9HD23 443 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 STARD7Q9NQZ5 370 aa9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CXXC1Q9P0U4 656 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQA1-204ENST00000422863 BRWD1Q9NSI6 2320 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TRIP12Q14669 1992 aaPredicted RBP9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SYNGAP1Q96PV0 1343 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 A0A1W2PRG0 241 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MYADML2A6NDP7 307 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MPHOSPH10O00566 681 aaKnown RBP9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SRGAP3O43295 1099 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CYP2C18P33260 490 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 GUCY1A2P33402 732 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 USP5P45974 858 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ACLYP53396 1101 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PPIGQ13427 754 aaKnown RBP eCLIP9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SEPT2Q15019 361 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TMEM31Q5JXX7 168 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TATDN1Q6P1N9 297 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ANKRD33Q7Z3H0 272 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MIGA1Q8NAN2 632 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MEIS3Q99687 375 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SLC28A3Q9HAS3 691 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CABP5Q9NP86 173 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SLC5A4Q9NY91 659 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 HOXC10Q9NYD6 342 aa9.17□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ADAMTS4O75173 837 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CYP2E1P05181 493 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 FCER1AP12319 257 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CYP7A1P22680 504 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PLCD1P51178 756 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TTC39AQ5SRH9 613 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 RASIP1Q5U651 963 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 KRT40Q6A162 431 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ATF7IPQ6VMQ6 1270 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 OTOP2Q7RTS6 562 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 FAM9BQ8IZU0 186 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ATG4CQ96DT6 458 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TOX2Q96NM4 488 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MMP19Q99542 508 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TINF2Q9BSI4 451 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 CERS4Q9HA82 394 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TBX21Q9UL17 535 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PIEZO1Q92508 2521 aa9.16□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PTPRSQ13332 1948 aa9.15□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SYNRGQ9UMZ2 1314 aa9.15□□□□□ -0.94
HLA-DQA1-204ENST00000422863 UQCRFS1P1P0C7P4 283 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms