RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ZMYND8Q9ULU4 1186 aaPredicted RBP25.3■■□□□ 1.64
PTPN4-202ENST00000420482 KBTBD13C9JR72 458 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 ATP2A1O14983 1001 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 BMP3P12645 472 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 MCMDC2Q4G0Z9 681 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 SLFN13Q68D06 897 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 DDX11Q96FC9 970 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 FBXO40Q9UH90 709 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 STX8Q9UNK0 236 aa25.29■■□□□ 1.64
PTPN4-202ENST00000420482 OAZ1P54368 228 aa25.28■■□□□ 1.64
PTPN4-202ENST00000420482 MFAP1P55081 439 aaKnown RBP25.28■■□□□ 1.64
PTPN4-202ENST00000420482 SMC5Q8IY18 1101 aa25.28■■□□□ 1.64
PTPN4-202ENST00000420482 CPXCR1Q8N123 301 aa25.28■■□□□ 1.64
PTPN4-202ENST00000420482 CHURC1Q8WUH1 139 aa25.28■■□□□ 1.64
PTPN4-202ENST00000420482 TINF2Q9BSI4 451 aa25.28■■□□□ 1.64
PTPN4-202ENST00000420482 ANAPC4Q9UJX5 808 aa25.28■■□□□ 1.64
PTPN4-202ENST00000420482 PGK2P07205 417 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 SLC4A3P48751 1232 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 STAT2P52630 851 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 IKQ13123 557 aaPredicted RBP25.27■■□□□ 1.64
PTPN4-202ENST00000420482 ALX1Q15699 326 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 ZNF792Q3KQV3 632 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 MSL3Q8N5Y2 521 aaKnown RBP25.27■■□□□ 1.64
PTPN4-202ENST00000420482 LRCH3Q96II8 777 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 CNPY2Q9Y2B0 182 aa25.27■■□□□ 1.64
PTPN4-202ENST00000420482 RANBP6O60518 1105 aaKnown RBP25.26■■□□□ 1.63
PTPN4-202ENST00000420482 SYN1P17600 705 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 SLC1A4P43007 532 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 CTDSPL2Q05D32 466 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 LRRC26Q2I0M4 334 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 B4GALNT3Q6L9W6 998 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 FAM160B2Q86V87 743 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 RILPL2Q969X0 211 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 GMCL1Q96IK5 515 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 SLC38A10Q9HBR0 1119 aa25.26■■□□□ 1.63
PTPN4-202ENST00000420482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.26■■□□□ 1.63
PTPN4-202ENST00000420482 ZNFX1Q9P2E3 1918 aaKnown RBP25.25■■□□□ 1.63
PTPN4-202ENST00000420482 MYCNP04198 464 aaPredicted RBP25.25■■□□□ 1.63
PTPN4-202ENST00000420482 RARBP10826 455 aa25.25■■□□□ 1.63
PTPN4-202ENST00000420482 PRAMEF19Q5SWL8 479 aa25.25■■□□□ 1.63
PTPN4-202ENST00000420482 CHD1LQ86WJ1 897 aa25.25■■□□□ 1.63
PTPN4-202ENST00000420482 CHST13Q8NET6 341 aa25.25■■□□□ 1.63
PTPN4-202ENST00000420482 TOMM22Q9NS69 142 aa25.25■■□□□ 1.63
PTPN4-202ENST00000420482 PRKAG2Q9UGJ0 569 aa25.25■■□□□ 1.63
PTPN4-202ENST00000420482 TMEM232C9JQI7 657 aa25.24■■□□□ 1.63
PTPN4-202ENST00000420482 GJC2Q5T442 439 aaPredicted RBP25.24■■□□□ 1.63
PTPN4-202ENST00000420482 VPS53Q5VIR6 699 aa25.24■■□□□ 1.63
PTPN4-202ENST00000420482 ANKRD35Q8N283 1001 aa25.24■■□□□ 1.63
PTPN4-202ENST00000420482 RAVER2Q9HCJ3 691 aaKnown RBP25.24■■□□□ 1.63
PTPN4-202ENST00000420482 ZMYM6O95789 1325 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 FOXP2O15409 715 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 ORC4O43929 436 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 ANO1Q5XXA6 986 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 STAG1Q8WVM7 1258 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 FAM227BQ96M60 508 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 PLXNA1Q9UIW2 1896 aa25.23■■□□□ 1.63
PTPN4-202ENST00000420482 SYNGAP1Q96PV0 1343 aa25.22■■□□□ 1.63
PTPN4-202ENST00000420482 A0A0D9SFI3 127 aa25.22■■□□□ 1.63
PTPN4-202ENST00000420482 AKR1A1P14550 325 aa25.22■■□□□ 1.63
PTPN4-202ENST00000420482 MAGEA10P43363 369 aaPredicted RBP25.22■■□□□ 1.63
PTPN4-202ENST00000420482 RNF180Q86T96 592 aa25.22■■□□□ 1.63
PTPN4-202ENST00000420482 XPNPEP3Q9NQH7 507 aa25.22■■□□□ 1.63
PTPN4-202ENST00000420482 RIPK3Q9Y572 518 aa25.22■■□□□ 1.63
PTPN4-202ENST00000420482 CCDC171Q6TFL3 1326 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 PLA2G6O60733 806 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 FGAP02671 866 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 PCP11498 1178 aaKnown RBP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 MCCP23508 829 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 ATN1P54259 1190 aaPredicted RBP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 NUCB1Q02818 461 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 NMIQ13287 307 aaPredicted RBP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 GPR153Q6NV75 609 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 ZNF467Q7Z7K2 595 aaPredicted RBP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 LBHD1Q9BQE6 289 aaPredicted RBP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 UBE2OQ9C0C9 1292 aaKnown RBP25.21■■□□□ 1.63
PTPN4-202ENST00000420482 DNAH12Q6ZR08 3092 aa25.21■■□□□ 1.63
PTPN4-202ENST00000420482 HSPD1P10809 573 aaKnown RBP25.2■■□□□ 1.62
PTPN4-202ENST00000420482 LRRC41Q15345 812 aa25.2■■□□□ 1.62
PTPN4-202ENST00000420482 RCSD1Q6JBY9 416 aa25.2■■□□□ 1.62
PTPN4-202ENST00000420482 EXOC6Q8TAG9 804 aa25.2■■□□□ 1.62
PTPN4-202ENST00000420482 OSBPL3Q9H4L5 887 aa25.2■■□□□ 1.62
PTPN4-202ENST00000420482 COL6A3P12111 3177 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 DNAJC25-GNG10A0A024R161 153 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 HIP1O00291 1037 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 FGRP09769 529 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 TKFCQ3LXA3 575 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 LRIT3Q3SXY7 679 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 RRP12Q5JTH9 1297 aaKnown RBP25.19■■□□□ 1.62
PTPN4-202ENST00000420482 MAMDC4Q6UXC1 1216 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 ACAD9Q9H845 621 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 IL17RBQ9NRM6 502 aa25.19■■□□□ 1.62
PTPN4-202ENST00000420482 SDSP20132 328 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 RTP1P59025 263 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 SLC39A5Q6ZMH5 540 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 MFSD6Q6ZSS7 791 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 TDHQ8IZJ6 230 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 RNF41Q9H4P4 317 aaPredicted RBP25.18■■□□□ 1.62
PTPN4-202ENST00000420482 INCENPQ9NQS7 918 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 DIAPH3Q9NSV4 1193 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms