RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 KDM4AO75164 1064 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 FCER1AP12319 257 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 MCCP23508 829 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 KCTD2Q14681 263 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 RCSD1Q6JBY9 416 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 DPP9Q86TI2 863 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 REPS2Q8NFH8 660 aa16.71■□□□□ 0.27
SLC13A3-205ENST00000417157 RPTORQ8N122 1335 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 PARP14Q460N5 1801 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 HTTP42858 3142 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 ADORA2AP29274 412 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 GJA8P48165 433 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 MFSD14CQ5VZR4 134 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 SNRNP48Q6IEG0 339 aaKnown RBP16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 UBAC1Q9BSL1 405 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 SLC38A10Q9HBR0 1119 aa16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 HMX1Q9NP08 348 aaPredicted RBP16.7■□□□□ 0.26
SLC13A3-205ENST00000417157 B4E1Z4 1266 aa16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 PRKAR2AP13861 404 aaKnown RBP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 EN2P19622 333 aaPredicted RBP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 MMP19Q99542 508 aa16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 PAK6Q9NQU5 681 aaPredicted RBP16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
SLC13A3-205ENST00000417157 PLXNB2O15031 1838 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 MAP3K21Q5TCX8 1036 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 OLFML2BQ68BL8 750 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 MAP4K1Q92918 833 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 KAT14Q9H8E8 782 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 PNMA2Q9UL42 364 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 MTMR7Q9Y216 660 aa16.68■□□□□ 0.26
SLC13A3-205ENST00000417157 CDC45O75419 566 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 SGPL1O95470 568 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 CYP21A2P08686 494 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 PTH1RQ03431 593 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 CPXCR1Q8N123 301 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 CHST13Q8NET6 341 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 DEFB118Q96PH6 123 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 TNKSO95271 1327 aa16.67■□□□□ 0.26
SLC13A3-205ENST00000417157 ERICH2A1L162 156 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 PDHBP11177 359 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 CCL14Q16627 93 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 TKFCQ3LXA3 575 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 PNMA1Q8ND90 353 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 DIS3Q9Y2L1 958 aaKnown RBP16.66■□□□□ 0.26
SLC13A3-205ENST00000417157 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 SHISA4Q96DD7 197 aa16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
SLC13A3-205ENST00000417157 DOCK3Q8IZD9 2030 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 MSCO60682 206 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 TRIM32Q13049 653 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 ENAHQ8N8S7 591 aaPredicted RBP16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 ANKLE1Q8NAG6 615 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 CRISPLD2Q9H0B8 497 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 ACAD9Q9H845 621 aa16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 FRMPD2Q68DX3 1309 aaPredicted RBP16.64■□□□□ 0.25
SLC13A3-205ENST00000417157 COL11A1P12107 1806 aaPredicted RBP16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 E7EWF7 191 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 COBLO75128 1261 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 MAML3Q96JK9 1138 aa16.63■□□□□ 0.25
SLC13A3-205ENST00000417157 RANBP17Q9H2T7 1088 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms