RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
UBE2D4-202ENST00000415051 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
UBE2D4-202ENST00000415051 SH2D4AQ9H788 454 aa20.8■□□□□ 0.92
UBE2D4-202ENST00000415051 ELP1O95163 1332 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 DNAJC25-GNG10A0A024R161 153 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 PRKAB2O43741 272 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 EEF2P13639 858 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 SLFNL1Q499Z3 407 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 MAMDC4Q6UXC1 1216 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 AACSQ86V21 672 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 MSL3Q8N5Y2 521 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 CXXC1Q9P0U4 656 aaPredicted RBP20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 FAM184BQ9ULE4 1060 aa20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 TCF20Q9UGU0 1960 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-202ENST00000415051 SYNGAP1Q96PV0 1343 aa20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 GREB1LQ9C091 1923 aaPredicted RBP20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 DUSP11O75319 330 aaKnown RBP20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 CDK8P49336 464 aa20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 ARMT1Q9H993 441 aa20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 RIPK3Q9Y572 518 aa20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
UBE2D4-202ENST00000415051 CTAGE5O15320 804 aa20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 ASGR1P07306 291 aa20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 FAM83BQ5T0W9 1011 aa20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 FGD4Q96M96 766 aa20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 GLT1D1Q96MS3 346 aa20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 NECAB3Q96P71 396 aaPredicted RBP20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 UPF3AQ9H1J1 476 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 EXOC6BQ9Y2D4 811 aa20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 YBX2Q9Y2T7 364 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-202ENST00000415051 ARVCFO00192 962 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 TTF1Q15361 905 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 C12orf60Q5U649 245 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 ZKSCAN2Q63HK3 967 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 PSRC1Q6PGN9 363 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 HERVK_113Q902F9 699 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 CCDC17Q96LX7 622 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 PPP1R12CQ9BZL4 782 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 NKX2-4Q9H2Z4 354 aa20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 ZHX1Q9UKY1 873 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-202ENST00000415051 CD4P01730 458 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 RLBP1P12271 317 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 IGFBP4P22692 258 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 CYP2C18P33260 490 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 COPB2P35606 906 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 GJA9P57773 515 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 CEP85Q6P2H3 762 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 CCDC174Q6PII3 467 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 C16orf86Q6ZW13 317 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
UBE2D4-202ENST00000415051 A0A0U1RQG5 324 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 GOLIM4O00461 696 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 BMP1P13497 986 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 ACVR2BQ13705 512 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 RAB30Q15771 203 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 ZNF467Q7Z7K2 595 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 FAM122AQ96E09 287 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 NUP88Q99567 741 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 KANSL2Q9H9L4 492 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 IL23AQ9NPF7 189 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 ATP8A2Q9NTI2 1148 aa20.74■□□□□ 0.91
UBE2D4-202ENST00000415051 MBD4O95243 580 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 CHGBP05060 677 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 CCDC144BQ3MJ40 725 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 SNRNP48Q6IEG0 339 aaKnown RBP20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 PCSK9Q8NBP7 692 aaKnown RBP20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 TEX13BQ9BXU2 312 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 KATNBL1Q9H079 304 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 GOPCQ9HD26 462 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 MSRAQ9UJ68 235 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 UMODL1Q5DID0 1318 aa20.73■□□□□ 0.91
UBE2D4-202ENST00000415051 USP17L12C9JPN9 530 aa20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 USP17L21D6R901 530 aa20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 NKX3-2P78367 333 aa20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 VWCEQ96DN2 955 aa20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 DNAJC2Q99543 621 aaKnown RBP20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
UBE2D4-202ENST00000415051 ADD2P35612 726 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 TFF2Q03403 129 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 ERC1Q8IUD2 1116 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 SLC43A3Q8NBI5 491 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 DDX11Q96FC9 970 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 ASTN1O14525 1302 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
UBE2D4-202ENST00000415051 ATP2A1O14983 1001 aa20.7■□□□□ 0.9
UBE2D4-202ENST00000415051 RAD21O60216 631 aa20.7■□□□□ 0.9
UBE2D4-202ENST00000415051 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
UBE2D4-202ENST00000415051 RABGGTBP53611 331 aa20.7■□□□□ 0.9
UBE2D4-202ENST00000415051 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
UBE2D4-202ENST00000415051 ITPRIPQ8IWB1 547 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms