RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 G6PC3Q9BUM1 346 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 ASCC2Q9H1I8 757 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-209ENST00000415046 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 EBF1Q9UH73 591 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 KIF13AQ9H1H9 1805 aa7.01□□□□□ -1.29
PTPRK-209ENST00000415046 TMEM253P0C7T8 217 aa7.01□□□□□ -1.29
PTPRK-209ENST00000415046 POLR2BP30876 1174 aaKnown RBP7.01□□□□□ -1.29
PTPRK-209ENST00000415046 SNX17Q15036 470 aa7.01□□□□□ -1.29
PTPRK-209ENST00000415046 NBPF12Q5TAG4 269 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-209ENST00000415046 SPPL2CQ8IUH8 684 aa7.01□□□□□ -1.29
PTPRK-209ENST00000415046 REXO1Q8N1G1 1221 aaKnown RBP7.01□□□□□ -1.29
PTPRK-209ENST00000415046 DAGLBQ8NCG7 672 aa7.01□□□□□ -1.29
PTPRK-209ENST00000415046 UBP1Q9NZI7 540 aa7.01□□□□□ -1.29
PTPRK-209ENST00000415046 YBX2Q9Y2T7 364 aaKnown RBP7.01□□□□□ -1.29
PTPRK-209ENST00000415046 TSPOAP1O95153 1857 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 NBPF9Q3BBW0 867 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 SEZ6Q53EL9 994 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 LCNL1Q6ZST4 164 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 ZNF655Q8N720 491 aaPredicted RBP7□□□□□ -1.29
PTPRK-209ENST00000415046 ATG4CQ96DT6 458 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 INTS4Q96HW7 963 aaKnown RBP7□□□□□ -1.29
PTPRK-209ENST00000415046 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 BCL11AQ9H165 835 aa7□□□□□ -1.29
PTPRK-209ENST00000415046 ZCCHC11Q5TAX3 1644 aaKnown RBP6.99□□□□□ -1.29
PTPRK-209ENST00000415046 MEIS3P2A8K0S8 358 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 ETV2O00321 342 aaPredicted RBP6.99□□□□□ -1.29
PTPRK-209ENST00000415046 CCNFP41002 786 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 CLCQ05315 142 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 APOBRQ0VD83 1088 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 ATG14Q6ZNE5 492 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 TMC3Q7Z5M5 1100 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 SHISA4Q96DD7 197 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 GPR160Q9UJ42 338 aa6.99□□□□□ -1.29
PTPRK-209ENST00000415046 TNIKQ9UKE5 1360 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 EFCAB5A4FU69 1503 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 TCAF2A6NFQ2 919 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 NPIPB6E9PJ23 425 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 SNW1Q13573 536 aaKnown RBP6.98□□□□□ -1.29
PTPRK-209ENST00000415046 KCNA10Q16322 511 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 GK5Q6ZS86 529 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 SIAH1Q8IUQ4 282 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 SLITRK4Q8IW52 837 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 TCTN2Q96GX1 697 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 NT5C1AQ9BXI3 368 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 FOXP3Q9BZS1 431 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 TCFL5Q9UL49 500 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 PTPRGP23470 1445 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 LRRIQ1Q96JM4 1722 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 RAPGEF6Q8TEU7 1601 aa6.98□□□□□ -1.29
PTPRK-209ENST00000415046 TMEM82A0PJX8 343 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 TNFRSF10CO14798 259 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 PSPNO60542 156 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 PEX10O60683 326 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 CLEC3AO75596 197 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 ZNF165P49910 485 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 PCBP3P57721 371 aaKnown RBP6.97□□□□□ -1.29
PTPRK-209ENST00000415046 LRRFIP1Q32MZ4 808 aaKnown RBP6.97□□□□□ -1.29
PTPRK-209ENST00000415046 BBS9Q3SYG4 887 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 LDLRAD1Q5T700 205 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 LINC00116Q8NCU8 138 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
PTPRK-209ENST00000415046 ABCC2Q92887 1545 aa6.96□□□□□ -1.29
PTPRK-209ENST00000415046 ABCA8O94911 1581 aa6.96□□□□□ -1.29
PTPRK-209ENST00000415046 FHOD3Q2V2M9 1422 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 SIGLEC6O43699 453 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 SEMA7AO75326 666 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 USP2O75604 605 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 PRAMEF1O95521 474 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 EFEMP2O95967 443 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 RPL10P27635 214 aaKnown RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 KIR2DL1P43626 348 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 KIR2DL2P43627 348 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 WAPLQ7Z5K2 1190 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 NLRX1Q86UT6 975 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 KCNN1Q92952 543 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 MAP6Q96JE9 813 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 ANTXR1Q9H6X2 564 aa6.96□□□□□ -1.3
PTPRK-209ENST00000415046 SMG5Q9UPR3 1016 aaKnown RBP6.96□□□□□ -1.3
PTPRK-209ENST00000415046 MYOCOSA0A1B0GUC4 107 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 ZNF16P17020 682 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-209ENST00000415046 MCM4P33991 863 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 LINC00310P59036 64 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 AMIGO3Q86WK7 504 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 TMEM192Q8IY95 271 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 NKD1Q969G9 470 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-209ENST00000415046 ZNF512BQ96KM6 892 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-209ENST00000415046 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 ZNF552Q9H707 407 aaPredicted RBP6.95□□□□□ -1.3
PTPRK-209ENST00000415046 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
PTPRK-209ENST00000415046 ARHGAP35Q9NRY4 1499 aa6.94□□□□□ -1.3
PTPRK-209ENST00000415046 NRDCO43847 1150 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 456.2 ms