RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 COPB2P35606 906 aa18.47■□□□□ 0.55
ACTB-202ENST00000414620 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
ACTB-202ENST00000414620 PRPF38AQ8NAV1 312 aaKnown RBP18.47■□□□□ 0.55
ACTB-202ENST00000414620 FAM227BQ96M60 508 aa18.47■□□□□ 0.55
ACTB-202ENST00000414620 TEX13BQ9BXU2 312 aa18.47■□□□□ 0.55
ACTB-202ENST00000414620 RAVER2Q9HCJ3 691 aaKnown RBP18.47■□□□□ 0.55
ACTB-202ENST00000414620 A0A0D9SFI3 127 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 ZBED4O75132 1171 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 ZNF792Q3KQV3 632 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 GMCL1P1Q8NEA9 526 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 MKL1Q969V6 931 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.46■□□□□ 0.553e-23■■□□□ 14.2
ACTB-202ENST00000414620 TACC3Q9Y6A5 838 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 LAMA4Q16363 1823 aa18.46■□□□□ 0.55
ACTB-202ENST00000414620 A0A1W2PPC1 479 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 KBTBD13C9JR72 458 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 NMT2O60551 498 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 BMP3P12645 472 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 TAL1P17542 331 aaPredicted RBP18.45■□□□□ 0.54
ACTB-202ENST00000414620 MDM2Q00987 491 aaPredicted RBP18.45■□□□□ 0.54
ACTB-202ENST00000414620 RASGRP2Q7LDG7 609 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 LRCH3Q96II8 777 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 TINF2Q9BSI4 451 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 MTMR7Q9Y216 660 aa18.45■□□□□ 0.54
ACTB-202ENST00000414620 BMP8BP34820 402 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 RTP1P59025 263 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 LENG1Q96BZ8 264 aaPredicted RBP18.44■□□□□ 0.54
ACTB-202ENST00000414620 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 HELLSQ9NRZ9 838 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 STX8Q9UNK0 236 aa18.44■□□□□ 0.54
ACTB-202ENST00000414620 LCTP09848 1927 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 TMEM232C9JQI7 657 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 IKQ13123 557 aaPredicted RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 NMIQ13287 307 aaPredicted RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 LRRC41Q15345 812 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 ZNF589Q86UQ0 364 aaPredicted RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 FERMT2Q96AC1 680 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 UBE2OQ9C0C9 1292 aaKnown RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 TOMM22Q9NS69 142 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 HOMER2Q9NSB8 354 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 SYNPO2Q9UMS6 1093 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 ATP11BQ9Y2G3 1177 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 DIS3Q9Y2L1 958 aaKnown RBP18.43■□□□□ 0.54
ACTB-202ENST00000414620 LRRC37A2A6NM11 1700 aa18.43■□□□□ 0.54
ACTB-202ENST00000414620 IGHDP01880 384 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 MCCP23508 829 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 SLC1A4P43007 532 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 STAT2P52630 851 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
ACTB-202ENST00000414620 XPNPEP3Q9NQH7 507 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
ACTB-202ENST00000414620 ATP2A1O14983 1001 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 PGK1P00558 417 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 ZNF865P0CJ78 1059 aaPredicted RBP18.41■□□□□ 0.54
ACTB-202ENST00000414620 RARBP10826 455 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 ADCYAP1R1P41586 468 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 SNAP25P60880 206 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 HAND2P61296 217 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
ACTB-202ENST00000414620 ZHX1Q9UKY1 873 aaPredicted RBP18.41■□□□□ 0.54
ACTB-202ENST00000414620 AKR1A1P14550 325 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 TRIM60Q495X7 471 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 SLC39A5Q6ZMH5 540 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 TDHQ8IZJ6 230 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 ANKRD35Q8N283 1001 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 GMCL1Q96IK5 515 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
ACTB-202ENST00000414620 NRBP1Q9UHY1 535 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
ACTB-202ENST00000414620 DNAJC25-GNG10A0A024R161 153 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
ACTB-202ENST00000414620 FGAP02671 866 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 HSPD1P10809 573 aaKnown RBP18.39■□□□□ 0.53
ACTB-202ENST00000414620 OAZ1P54368 228 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 AAMPQ13685 434 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 ALX1Q15699 326 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 CCDC96Q2M329 555 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 FAM160B2Q86V87 743 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 STAG1Q8WVM7 1258 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
ACTB-202ENST00000414620 RANBP2P49792 3224 aaKnown RBP18.38■□□□□ 0.53
ACTB-202ENST00000414620 ORC4O43929 436 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 PLEKHM2Q8IWE5 1019 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 CHST13Q8NET6 341 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms