RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 PDZD3Q86UT5 571 aa7.46□□□□□ -1.22
NOD1-203ENST00000413433 DDX42Q86XP3 938 aaKnown RBP eCLIP7.46□□□□□ -1.22
NOD1-203ENST00000413433 ELMO3Q96BJ8 720 aa7.46□□□□□ -1.22
NOD1-203ENST00000413433 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
NOD1-203ENST00000413433 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
NOD1-203ENST00000413433 PCDHB10Q9UN67 800 aa7.46□□□□□ -1.22
NOD1-203ENST00000413433 KDM5AP29375 1690 aaKnown RBP7.46□□□□□ -1.22
NOD1-203ENST00000413433 ROCK1Q13464 1354 aa7.46□□□□□ -1.22
NOD1-203ENST00000413433 GCC2Q8IWJ2 1684 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 KCNQ2O43526 872 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 NME1P15531 152 aaKnown RBP7.45□□□□□ -1.22
NOD1-203ENST00000413433 PMLP29590 882 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 CDK8P49336 464 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 SLC7A5Q01650 507 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 ZYXQ15942 572 aaKnown RBP7.45□□□□□ -1.22
NOD1-203ENST00000413433 HDXQ7Z353 690 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 SYT9Q86SS6 491 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 WDR75Q8IWA0 830 aaKnown RBP7.45□□□□□ -1.22
NOD1-203ENST00000413433 GPBAR1Q8TDU6 330 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
NOD1-203ENST00000413433 LRRC59Q96AG4 307 aaKnown RBP7.45□□□□□ -1.22
NOD1-203ENST00000413433 ORAI2Q96SN7 254 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 SMG9Q9H0W8 520 aaKnown RBP7.45□□□□□ -1.22
NOD1-203ENST00000413433 CORINQ9Y5Q5 1042 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 SNCAIPQ9Y6H5 919 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 PRR36Q9H6K5 1346 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 MYO5BQ9ULV0 1848 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 PIK3R4Q99570 1358 aa7.45□□□□□ -1.22
NOD1-203ENST00000413433 SETD1AO15047 1707 aaKnown RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 CHD2O14647 1828 aaKnown RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 ADCY3O60266 1144 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 RFPL3O75679 317 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 NAT2P11245 290 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 CPEP16870 476 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 GSTM4Q03013 218 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 GNPTABQ3T906 1256 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 UBR7Q8N806 425 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 ATG4CQ96DT6 458 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 KIF2CQ99661 725 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 CORO1BQ9BR76 489 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 FAM126AQ9BYI3 521 aaPredicted RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 NCOA5Q9HCD5 579 aaKnown RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 SH2B1Q9NRF2 756 aaPredicted RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 KLHL3Q9UH77 587 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 TRIM33Q9UPN9 1127 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 THRAP3Q9Y2W1 955 aaKnown RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 COL16A1Q07092 1604 aaPredicted RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 E9PCH4 1651 aa7.44□□□□□ -1.22
NOD1-203ENST00000413433 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.44□□□□□ -1.22
NOD1-203ENST00000413433 A0A087X0B3 334 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 ACRP10323 421 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 CDC27P30260 824 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 ARL4DP49703 201 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 CBX2Q14781 532 aaPredicted RBP7.43□□□□□ -1.22
NOD1-203ENST00000413433 SV2CQ496J9 727 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 C8orf48Q96LL4 319 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 RUSC1Q9BVN2 902 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 ZFP64Q9NPA5 681 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 SLC6A14Q9UN76 642 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 LTBP3Q9NS15 1303 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 MST1RQ04912 1400 aa7.43□□□□□ -1.22
NOD1-203ENST00000413433 UNC13BO14795 1591 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 H3BRJ5 948 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 GFRA2O00451 464 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 TNFRSF10CO14798 259 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 PLD2O14939 933 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 ALDH1L1O75891 902 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 CYP11A1P05108 521 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 ARAFP10398 606 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 RAG1P15918 1043 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 L1CAMP32004 1257 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 EPHB1P54762 984 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 FNDC3BQ53EP0 1204 aaKnown RBP7.42□□□□□ -1.22
NOD1-203ENST00000413433 ARTNQ5T4W7 220 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 GDF6Q6KF10 455 aaPredicted RBP7.42□□□□□ -1.22
NOD1-203ENST00000413433 LRFN4Q6PJG9 635 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 SLC7A3Q8WY07 619 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 SLC9A7Q96T83 725 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 KRT82Q9NSB4 513 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 MAPRE3Q9UPY8 281 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 TRPM2O94759 1503 aa7.42□□□□□ -1.22
NOD1-203ENST00000413433 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 PRAMEF27A3QJZ7 478 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 SOX1O00570 391 aaPredicted RBP7.41□□□□□ -1.22
NOD1-203ENST00000413433 SIN3BO75182 1162 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 EPHA1P21709 976 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 RBM6P78332 1123 aaKnown RBP7.41□□□□□ -1.22
NOD1-203ENST00000413433 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 INPP5AQ14642 412 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 RSPO4Q2I0M5 234 aaPredicted RBP7.41□□□□□ -1.22
NOD1-203ENST00000413433 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 BBS9Q3SYG4 887 aa7.41□□□□□ -1.22
NOD1-203ENST00000413433 ZNF468Q5VIY5 522 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms