RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 JRKLQ9Y4A0 524 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 CNTNAP1P78357 1384 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 FRMPD2Q68DX3 1309 aaPredicted RBP12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 STK36Q9NRP7 1315 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 GOLGA6L6A8MZA4 724 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 RCAN1P53805 252 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 NOM1Q5C9Z4 860 aaKnown RBP12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 ARMCX6Q7L4S7 300 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 AGBL3Q8NEM8 1001 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 FAM212AQ96EL1 285 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 PI4KBQ9UBF8 816 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 CLIC4Q9Y696 253 aa12.26□□□□□ -0.45
LRRTM4-204ENST00000409884 MYH15Q9Y2K3 1946 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 FAM205CA6NFA0 338 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 DEXIO95424 95 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 CALM1P0DP23 149 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 CALM2P0DP24 149 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 CALM3P0DP25 149 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 GPKOWQ92917 476 aaPredicted RBP eCLIP12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 DRC1Q96MC2 740 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 RNF26Q9BY78 433 aaPredicted RBP12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 IGKV6D-41A0A0C4DH26 115 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 RAD21O60216 631 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 EARS2Q5JPH6 523 aaKnown RBP12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 MICALL2Q8IY33 904 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 UBA5Q9GZZ9 404 aa12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 DHX36Q9H2U1 1008 aaKnown RBP12.25□□□□□ -0.45
LRRTM4-204ENST00000409884 PRPF3O43395 683 aaKnown RBP12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 MMP1P03956 469 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 LIG1P18858 919 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 TRIM29Q14134 588 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 GRM4Q14833 912 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 SEPT2Q15019 361 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 MYSM1Q5VVJ2 828 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 SYT17Q9BSW7 474 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 EHD4Q9H223 541 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 VAT1LQ9HCJ6 419 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
LRRTM4-204ENST00000409884 KLRF2D3W0D1 207 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 FZD9O00144 591 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 TOP1P11387 765 aaKnown RBP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 UBE2HP62256 183 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 GNL2Q13823 731 aaKnown RBP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 CERKLQ49MI3 558 aaPredicted RBP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 SIAH1Q8IUQ4 282 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 RPS6KL1Q9Y6S9 549 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 PALM3A6NDB9 673 aaPredicted RBP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 ENTPD3O75355 529 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 PDHBP11177 359 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 CYP2C19P33261 490 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 NOVP48745 357 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 TNIP1Q15025 636 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 KRT222Q8N1A0 295 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 ZBED3Q96IU2 234 aaPredicted RBP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 PLIN4Q96Q06 1357 aa12.23□□□□□ -0.45
LRRTM4-204ENST00000409884 LTBP3Q9NS15 1303 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 SYCE3A1L190 88 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 GH2P01242 217 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 EEF2P13639 858 aaKnown RBP12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 KIF5BP33176 963 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 PPP2R5AQ15172 486 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 PPP2R5BQ15173 497 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 NPY5RQ15761 445 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 TTBK2Q6IQ55 1244 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 TATDN1Q6P1N9 297 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 CCDC84Q86UT8 332 aaPredicted RBP12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 PAIP2Q9BPZ3 127 aaKnown RBP12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 SCAND2PQ9GZW5 306 aaPredicted RBP12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 WNT7AO00755 349 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 TTLL1O95922 423 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 PRAMEF18Q5VWM3 479 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 KCTD1Q719H9 257 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 WASF1Q92558 559 aa12.22□□□□□ -0.45
LRRTM4-204ENST00000409884 MYH4Q9Y623 1939 aa12.21□□□□□ -0.45
LRRTM4-204ENST00000409884 CTAGE5O15320 804 aa12.21□□□□□ -0.45
LRRTM4-204ENST00000409884 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms