RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 RXRAP19793 462 aa19.34■□□□□ 0.69
IMP4-202ENST00000409649 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
IMP4-202ENST00000409649 SYDE2Q5VT97 1194 aa19.34■□□□□ 0.69
IMP4-202ENST00000409649 LBX2Q6XYB7 198 aa19.34■□□□□ 0.69
IMP4-202ENST00000409649 CCDC144CPQ8IYA2 1237 aa19.34■□□□□ 0.69
IMP4-202ENST00000409649 GTF3C6Q969F1 213 aa19.34■□□□□ 0.69
IMP4-202ENST00000409649 LARP6Q9BRS8 491 aaKnown RBP19.34■□□□□ 0.69
IMP4-202ENST00000409649 LLPHQ9BRT6 129 aaKnown RBP19.34■□□□□ 0.69
IMP4-202ENST00000409649 ASCC2Q9H1I8 757 aaPredicted RBP19.34■□□□□ 0.69
IMP4-202ENST00000409649 CTDP1Q9Y5B0 961 aaPredicted RBP19.34■□□□□ 0.69
IMP4-202ENST00000409649 PTPRFP10586 1907 aa19.33■□□□□ 0.69
IMP4-202ENST00000409649 ZBED4O75132 1171 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 GOLGA8HP0CJ92 632 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 DSG3P32926 999 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 ANP32AP39687 249 aaKnown RBP19.33■□□□□ 0.68
IMP4-202ENST00000409649 GCLCP48506 637 aaPredicted RBP19.33■□□□□ 0.68
IMP4-202ENST00000409649 AKAP17AQ02040 695 aaKnown RBP19.33■□□□□ 0.68
IMP4-202ENST00000409649 STK3Q13188 491 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 DGKZQ13574 1117 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 TRIM22Q8IYM9 498 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 STAG2Q8N3U4 1231 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 SMCR8Q8TEV9 937 aaPredicted RBP19.33■□□□□ 0.68
IMP4-202ENST00000409649 KIFC2Q96AC6 838 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 TMX3Q96JJ7 454 aa19.33■□□□□ 0.68
IMP4-202ENST00000409649 IFNAR1P17181 557 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 HTRA3P83110 453 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 SCRN1Q12765 414 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 RAB11FIP4Q86YS3 637 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 FAM43AQ8N2R8 423 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 RRP36Q96EU6 259 aaKnown RBP19.32■□□□□ 0.68
IMP4-202ENST00000409649 PTPN18Q99952 460 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 RIOX1Q9H6W3 641 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 FAM217BQ9NTX9 383 aaPredicted RBP19.32■□□□□ 0.68
IMP4-202ENST00000409649 SEC63Q9UGP8 760 aaKnown RBP19.32■□□□□ 0.68
IMP4-202ENST00000409649 PRR12Q9ULL5 1215 aa19.32■□□□□ 0.68
IMP4-202ENST00000409649 IGF2BP3O00425 579 aaKnown RBP eCLIP19.31■□□□□ 0.68
IMP4-202ENST00000409649 AOC2O75106 756 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 CDC27P30260 824 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 ADD1P35611 737 aaKnown RBP19.31■□□□□ 0.68
IMP4-202ENST00000409649 OAZ1P54368 228 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 HERVK_113P62684 666 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 TTBK2Q6IQ55 1244 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 ADGRF4Q8IZF3 695 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 RNF26Q9BY78 433 aaPredicted RBP19.31■□□□□ 0.68
IMP4-202ENST00000409649 ZFYVE28Q9HCC9 887 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 ADAMTS5Q9UNA0 930 aa19.31■□□□□ 0.68
IMP4-202ENST00000409649 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.31■□□□□ 0.68
IMP4-202ENST00000409649 CD2BP2O95400 341 aaKnown RBP19.3■□□□□ 0.68
IMP4-202ENST00000409649 SLC16A2P36021 539 aa19.3■□□□□ 0.68
IMP4-202ENST00000409649 MAP2K1Q02750 393 aaPredicted RBP19.3■□□□□ 0.68
IMP4-202ENST00000409649 TAF1CQ15572 869 aaPredicted RBP19.3■□□□□ 0.68
IMP4-202ENST00000409649 RASGRP2Q7LDG7 609 aa19.3■□□□□ 0.68
IMP4-202ENST00000409649 SRBD1Q8N5C6 995 aaKnown RBP19.3■□□□□ 0.68
IMP4-202ENST00000409649 P2RX7Q99572 595 aaKnown RBP19.3■□□□□ 0.68
IMP4-202ENST00000409649 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
IMP4-202ENST00000409649 SLC38A10Q9HBR0 1119 aa19.3■□□□□ 0.68
IMP4-202ENST00000409649 NCOA5Q9HCD5 579 aaKnown RBP19.3■□□□□ 0.68
IMP4-202ENST00000409649 FBXO28Q9NVF7 368 aa19.3■□□□□ 0.68
IMP4-202ENST00000409649 KIF3AQ9Y496 699 aa19.3■□□□□ 0.68
IMP4-202ENST00000409649 SPDYE16A6NNV3 312 aaPredicted RBP19.29■□□□□ 0.68
IMP4-202ENST00000409649 hCG_1984214I3L0E3 225 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 VWA5AO00534 786 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 CA12O43570 354 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 PLEKHA8P1O95397 391 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 COPB2P35606 906 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 HMGN5P82970 282 aaKnown RBP19.29■□□□□ 0.68
IMP4-202ENST00000409649 SSRP1Q08945 709 aaKnown RBP19.29■□□□□ 0.68
IMP4-202ENST00000409649 NTRK3Q16288 839 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 ZNF713Q8N859 430 aaPredicted RBP19.29■□□□□ 0.68
IMP4-202ENST00000409649 NECAB1Q8N987 351 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 WASF1Q92558 559 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 RANBP17Q9H2T7 1088 aaKnown RBP19.29■□□□□ 0.68
IMP4-202ENST00000409649 JMJD4Q9H9V9 463 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 RABGAP1Q9Y3P9 1069 aa19.29■□□□□ 0.68
IMP4-202ENST00000409649 STK36Q9NRP7 1315 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 PNMA6FA0A0J9YX94 578 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 ATP2A1O14983 1001 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 ZBTB5O15062 677 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 PRPF3O43395 683 aaKnown RBP19.28■□□□□ 0.68
IMP4-202ENST00000409649 LARGE1O95461 756 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 CUL4AQ13619 759 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 CCDC83Q8IWF9 413 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 ATG4CQ96DT6 458 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 MTMR8Q96EF0 704 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 INTS4Q96HW7 963 aaKnown RBP19.28■□□□□ 0.68
IMP4-202ENST00000409649 ZIC5Q96T25 663 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 BEGAINQ9BUH8 593 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 CFHR5Q9BXR6 569 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 VAT1LQ9HCJ6 419 aa19.28■□□□□ 0.68
IMP4-202ENST00000409649 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.68
IMP4-202ENST00000409649 THSD7BQ9C0I4 1608 aa19.27■□□□□ 0.68
IMP4-202ENST00000409649 CYTH3O43739 400 aa19.27■□□□□ 0.68
IMP4-202ENST00000409649 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
IMP4-202ENST00000409649 CCNA1P78396 465 aa19.27■□□□□ 0.68
IMP4-202ENST00000409649 FUT2Q10981 343 aa19.27■□□□□ 0.68
IMP4-202ENST00000409649 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
IMP4-202ENST00000409649 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
IMP4-202ENST00000409649 FAM177A1Q8N128 213 aaPredicted RBP19.27■□□□□ 0.68
IMP4-202ENST00000409649 CCDC82Q8N4S0 544 aa19.27■□□□□ 0.68
IMP4-202ENST00000409649 AMNQ9BXJ7 453 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms