RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.45
FAM49A-202ENST00000406434 MCCP23508 829 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 CHMLP26374 656 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 STAT3P40763 770 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 IKQ13123 557 aaPredicted RBP12.21□□□□□ -0.45
FAM49A-202ENST00000406434 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 CCL14Q16627 93 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.45
FAM49A-202ENST00000406434 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 IL25Q9H293 177 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 RNF41Q9H4P4 317 aaPredicted RBP12.21□□□□□ -0.45
FAM49A-202ENST00000406434 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 RLFQ13129 1914 aa12.21□□□□□ -0.45
FAM49A-202ENST00000406434 ZMYM6O95789 1325 aa12.21□□□□□ -0.46
FAM49A-202ENST00000406434 PLXNB2O15031 1838 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 ZBED4O75132 1171 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 GJB1P08034 283 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
FAM49A-202ENST00000406434 SLC1A4P43007 532 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 IMMTQ16891 758 aaKnown RBP12.2□□□□□ -0.46
FAM49A-202ENST00000406434 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 STAG1Q8WVM7 1258 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 TRIB2Q92519 343 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 ESR2Q92731 530 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 USP6NLQ92738 828 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 DEFB118Q96PH6 123 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 ZKSCAN3Q9BRR0 538 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 MROH8Q9H579 483 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 FEM1BQ9UK73 627 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 ADAMTS5Q9UNA0 930 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 PLIN4Q96Q06 1357 aa12.2□□□□□ -0.46
FAM49A-202ENST00000406434 STRNO43815 780 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 SLC25A27O95847 323 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 ADORA2AP29274 412 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
FAM49A-202ENST00000406434 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 SHCBP1Q8NEM2 672 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 NPLOC4Q8TAT6 608 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 CHURC1Q8WUH1 139 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 HMX1Q9NP08 348 aaPredicted RBP12.19□□□□□ -0.46
FAM49A-202ENST00000406434 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 COL11A1P12107 1806 aaPredicted RBP12.19□□□□□ -0.46
FAM49A-202ENST00000406434 RPTORQ8N122 1335 aa12.19□□□□□ -0.46
FAM49A-202ENST00000406434 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
FAM49A-202ENST00000406434 B4E1Z4 1266 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 SGPL1O95470 568 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 FCER1AP12319 257 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 GJA8P48165 433 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 PTH1RQ03431 593 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 GRB14Q14449 540 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 MFSD14CQ5VZR4 134 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 SNRNP48Q6IEG0 339 aaKnown RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 RCSD1Q6JBY9 416 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 U2AF1L4Q8WU68 220 aaKnown RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 MMP19Q99542 508 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 APBA2Q99767 749 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 RAVER2Q9HCJ3 691 aaKnown RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 TCP11L1Q9NUJ3 509 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 NEDD4P46934 1319 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 COBLO75128 1261 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 KDM4AO75164 1064 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 STAT2P52630 851 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 SNAP25P60880 206 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 CACNB2Q08289 660 aaPredicted RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 REPS2Q8NFH8 660 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 GMCL1Q96IK5 515 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 SLC5A4Q9NY91 659 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 FLRT1Q9NZU1 646 aa12.18□□□□□ -0.46
FAM49A-202ENST00000406434 ZNF214Q9UL59 606 aaPredicted RBP12.18□□□□□ -0.46
FAM49A-202ENST00000406434 PARP14Q460N5 1801 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 TNRC18O15417 2968 aaPredicted RBP12.17□□□□□ -0.46
FAM49A-202ENST00000406434 RAD50Q92878 1312 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 SGSM2O43147 1006 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 PGK2P07205 417 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 CNGA1P29973 690 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 TTBK2Q6IQ55 1244 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 RASGRP2Q7LDG7 609 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 SHISA4Q96DD7 197 aa12.17□□□□□ -0.46
FAM49A-202ENST00000406434 TTC14Q96N46 770 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms