RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 ANKRD42Q8N9B4 389 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 INTS9Q9NV88 658 aaKnown RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 RWDD2AQ9UIY3 292 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 MED23Q9ULK4 1368 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 PDE6AP16499 860 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 CXCR5P32302 372 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 LONP1P36776 959 aaKnown RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 WHAMMQ8TF30 809 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 AIFM3Q96NN9 605 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 HMGB1P1B2RPK0 211 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 ARID4AP29374 1257 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 VSNL1P62760 191 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 PROSER3Q2NL68 480 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 COG1Q8WTW3 980 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 CNOT6LQ96LI5 555 aaKnown RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 LOC102724159A0A0B4J2E5 919 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 CTNND1O60716 968 aaKnown RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 SUN1O94901 812 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 GNA14O95837 355 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 PLA2G4AP47712 749 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 CYP27A1Q02318 531 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 PWP2Q15269 919 aaKnown RBP14.24□□□□□ -0.13
ERBB2-202ENST00000406381 KRT31Q15323 416 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 SPATA5Q8NB90 893 aa14.24□□□□□ -0.13
ERBB2-202ENST00000406381 NLRP1Q9C000 1473 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 LRRD1A4D1F6 860 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 FMNL1O95466 1100 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 MMP1P03956 469 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 IFNAR1P17181 557 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 MUM1Q2TAK8 710 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 ZNF658Q5TYW1 1059 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■□□□ 11.6
ERBB2-202ENST00000406381 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 FUCA2Q9BTY2 467 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 LSM14BQ9BX40 385 aaKnown RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 FRMD4BQ9Y2L6 1034 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 ATP7BP35670 1465 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 MRPL12P52815 198 aaKnown RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 SLC7A5Q01650 507 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 SIRT1Q96EB6 747 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 POLR1AO95602 1720 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 TSGA10IPQ3SY00 556 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 HHATQ5VTY9 493 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 NELFCDQ8IXH7 590 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 DHTKD1Q96HY7 919 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 NHEJ1Q9H9Q4 299 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-202ENST00000406381 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
ERBB2-202ENST00000406381 A1BGP04217 495 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 USP14P54578 494 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 NR5A1Q13285 461 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 TNKSO95271 1327 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 CCDC62Q6P9F0 684 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 GBP5Q96PP8 586 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 GPHNQ9NQX3 736 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 FHOD1Q9Y613 1164 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 PARP3Q9Y6F1 533 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 ANO9A1A5B4 782 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 H2AFZP0C0S5 128 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 PTPREP23469 700 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 PPARAQ07869 468 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 UBE3CQ15386 1083 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 H2AFVQ71UI9 128 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 ABHD10Q9NUJ1 306 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 POLR2FP61218 127 aaKnown RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 OSBP2Q969R2 916 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 KLHL29Q96CT2 875 aa14.22□□□□□ -0.13
ERBB2-202ENST00000406381 IRX2Q9BZI1 471 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 TRIM6Q9C030 488 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-202ENST00000406381 CALUO43852 315 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-202ENST00000406381 KIF1CO43896 1103 aaKnown RBP14.21□□□□□ -0.13
ERBB2-202ENST00000406381 IFNAR2P48551 515 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 TRAPPC10P48553 1259 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 ZKSCAN8Q15776 578 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-202ENST00000406381 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 DPF2Q92785 391 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 CNOT10Q9H9A5 744 aaKnown RBP14.21□□□□□ -0.13
ERBB2-202ENST00000406381 UGGT1Q9NYU2 1555 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 KRT15P19012 456 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 ANKRD20A3Q5VUR7 823 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 PAGE5Q96GU1 130 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 VIPAS39Q9H9C1 493 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 DENND2AQ9ULE3 1009 aa14.21□□□□□ -0.13
ERBB2-202ENST00000406381 SRGAP2O75044 1071 aa14.21□□□□□ -0.14
ERBB2-202ENST00000406381 STAT1P42224 750 aa14.21□□□□□ -0.14
ERBB2-202ENST00000406381 PCDHB6Q9Y5E3 794 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms