RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NUCB1Q02818 461 aa18.24■□□□□ 0.51
TPM1-207ENST00000403994 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
TPM1-207ENST00000403994 KCTD2Q14681 263 aa18.24■□□□□ 0.51
TPM1-207ENST00000403994 MCM3APO60318 1980 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 ATP2A1O14983 1001 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 SEPT4O43236 478 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 NMT2O60551 498 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 ALX1Q15699 326 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 KIFC2Q96AC6 838 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 FEM1BQ9UK73 627 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 ZMYND8Q9ULU4 1186 aaPredicted RBP18.23■□□□□ 0.51
TPM1-207ENST00000403994 LRRC37A2A6NM11 1700 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
TPM1-207ENST00000403994 LTBP2Q14767 1821 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 DNM1LO00429 736 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 ORC4O43929 436 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 BMP3P12645 472 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 ZNF792Q3KQV3 632 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 RASGRP2Q7LDG7 609 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 GMCL1Q96IK5 515 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 RIPK3Q9Y572 518 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 SMCHD1A6NHR9 2005 aa18.22■□□□□ 0.51
TPM1-207ENST00000403994 ZBED4O75132 1171 aa18.21■□□□□ 0.51
TPM1-207ENST00000403994 HSPD1P10809 573 aaKnown RBP18.21■□□□□ 0.51
TPM1-207ENST00000403994 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
TPM1-207ENST00000403994 PRAMEF19Q5SWL8 479 aa18.21■□□□□ 0.51
TPM1-207ENST00000403994 ANO1Q5XXA6 986 aa18.21■□□□□ 0.51
TPM1-207ENST00000403994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
TPM1-207ENST00000403994 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
TPM1-207ENST00000403994 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
TPM1-207ENST00000403994 DIS3Q9Y2L1 958 aaKnown RBP18.21■□□□□ 0.51
TPM1-207ENST00000403994 LCTP09848 1927 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 RANBP6O60518 1105 aaKnown RBP18.2■□□□□ 0.5
TPM1-207ENST00000403994 FGAP02671 866 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 FGRP09769 529 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 SYN1P17600 705 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 SLC1A4P43007 532 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 STAT2P52630 851 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 CPXCR1Q8N123 301 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 TINF2Q9BSI4 451 aa18.2■□□□□ 0.5
TPM1-207ENST00000403994 RAVER2Q9HCJ3 691 aaKnown RBP18.2■□□□□ 0.5
TPM1-207ENST00000403994 CTDP1Q9Y5B0 961 aaPredicted RBP18.2■□□□□ 0.5
TPM1-207ENST00000403994 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
TPM1-207ENST00000403994 NOVP48745 357 aa18.19■□□□□ 0.5
TPM1-207ENST00000403994 OAZ1P54368 228 aa18.19■□□□□ 0.5
TPM1-207ENST00000403994 GJC2Q5T442 439 aaPredicted RBP18.19■□□□□ 0.5
TPM1-207ENST00000403994 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
TPM1-207ENST00000403994 GDF15Q99988 308 aa18.19■□□□□ 0.5
TPM1-207ENST00000403994 SENP6Q9GZR1 1112 aaPredicted RBP18.19■□□□□ 0.5
TPM1-207ENST00000403994 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
TPM1-207ENST00000403994 DNAJC25-GNG10A0A024R161 153 aa18.18■□□□□ 0.5
TPM1-207ENST00000403994 TAL1P17542 331 aaPredicted RBP18.18■□□□□ 0.5
TPM1-207ENST00000403994 SDSP20132 328 aa18.18■□□□□ 0.5
TPM1-207ENST00000403994 MCCP23508 829 aa18.18■□□□□ 0.5
TPM1-207ENST00000403994 FAM160B2Q86V87 743 aa18.18■□□□□ 0.5
TPM1-207ENST00000403994 TOMM22Q9NS69 142 aa18.18■□□□□ 0.5
TPM1-207ENST00000403994 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
TPM1-207ENST00000403994 KBTBD13C9JR72 458 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 MAGEA10P43363 369 aaPredicted RBP18.17■□□□□ 0.5
TPM1-207ENST00000403994 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 HAND2P61296 217 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
TPM1-207ENST00000403994 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 TBC1D10CQ8IV04 446 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 ARRDC4Q8NCT1 418 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 HOMER2Q9NSB8 354 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 FBXO40Q9UH90 709 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 SYNGAP1Q96PV0 1343 aa18.17■□□□□ 0.5
TPM1-207ENST00000403994 PLA2G6O60733 806 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 ZNF865P0CJ78 1059 aaPredicted RBP18.16■□□□□ 0.5
TPM1-207ENST00000403994 FDX1P10109 184 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
TPM1-207ENST00000403994 MFAP1P55081 439 aaKnown RBP18.16■□□□□ 0.5
TPM1-207ENST00000403994 LRRC41Q15345 812 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 RRP12Q5JTH9 1297 aaKnown RBP18.16■□□□□ 0.5
TPM1-207ENST00000403994 MSL3Q8N5Y2 521 aaKnown RBP18.16■□□□□ 0.5
TPM1-207ENST00000403994 CHST13Q8NET6 341 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 CHURC1Q8WUH1 139 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 LENG1Q96BZ8 264 aaPredicted RBP18.16■□□□□ 0.5
TPM1-207ENST00000403994 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 FGD4Q96M96 766 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 DIAPH3Q9NSV4 1193 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 ZNF536O15090 1300 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 NEDD4P46934 1319 aa18.16■□□□□ 0.5
TPM1-207ENST00000403994 COL6A3P12111 3177 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms