RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FAM84BQ96KN1 310 aaPredicted RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 NAA15Q9BXJ9 866 aaKnown RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 RABEP2Q9H5N1 569 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 GNL3LQ9NVN8 582 aaKnown RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 COL1A1P02452 1464 aaPredicted RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 LRRIQ3A6PVS8 624 aaPredicted RBP13.48□□□□□ -0.25
RBM39-206ENST00000403542 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 STX8Q9UNK0 236 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
RBM39-206ENST00000403542 LRP6O75581 1613 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 KCNQ2O43526 872 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 NDUFA10O95299 355 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 CASP8Q14790 479 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 BRD3Q15059 726 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 HDXQ7Z353 690 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 SMCR8Q8TEV9 937 aaPredicted RBP13.48□□□□□ -0.25
RBM39-206ENST00000403542 VAT1LQ9HCJ6 419 aa13.48□□□□□ -0.25
RBM39-206ENST00000403542 DCP1AQ9NPI6 582 aaPredicted RBP13.48□□□□□ -0.25
RBM39-206ENST00000403542 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 SIK1P57059 783 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 TFAP4Q01664 338 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 KIAA1328Q86T90 577 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 TXNRD3Q86VQ6 643 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 MMS19Q96T76 1030 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
RBM39-206ENST00000403542 PLEKHG2Q9H7P9 1386 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 CHD4Q14839 1912 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 GTPBP6O43824 516 aaPredicted RBP13.47□□□□□ -0.25
RBM39-206ENST00000403542 TRIM21P19474 475 aaKnown RBP13.47□□□□□ -0.25
RBM39-206ENST00000403542 UBA7P41226 1012 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
RBM39-206ENST00000403542 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
RBM39-206ENST00000403542 LRRC15Q8TF66 581 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 AK7Q96M32 723 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
RBM39-206ENST00000403542 LIMA1Q9UHB6 759 aaKnown RBP13.47□□□□□ -0.25
RBM39-206ENST00000403542 L1RE1Q9UN81 338 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 MINPP1Q9UNW1 487 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 TAF1P21675 1872 aa13.47□□□□□ -0.25
RBM39-206ENST00000403542 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 MAP2K7O14733 419 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.46□□□□□ -0.25
RBM39-206ENST00000403542 KRT26Q7Z3Y9 468 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 GPR101Q96P66 508 aaPredicted RBP13.46□□□□□ -0.25
RBM39-206ENST00000403542 LACRTQ9GZZ8 138 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 MYH6P13533 1939 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 ERLIN1O75477 346 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 DNA2P51530 1060 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.25
RBM39-206ENST00000403542 TSR1Q2NL82 804 aaKnown RBP13.46□□□□□ -0.25
RBM39-206ENST00000403542 BLIDQ8IZY5 108 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 CAGE1Q8TC20 777 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
RBM39-206ENST00000403542 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
RBM39-206ENST00000403542 NUP98P52948 1817 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 NID2Q14112 1375 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 ATP8B1O43520 1251 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 PLEKP08567 350 aaPredicted RBP13.46□□□□□ -0.26
RBM39-206ENST00000403542 FCER1AP12319 257 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 HSP90B2PQ58FF3 399 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 DTHD1Q6ZMT9 781 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 NSUN4Q96CB9 384 aaKnown RBP13.46□□□□□ -0.26
RBM39-206ENST00000403542 TRIM34Q9BYJ4 488 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 JADE2Q9NQC1 790 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 SMARCAL1Q9NZC9 954 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 ANAPC4Q9UJX5 808 aa13.46□□□□□ -0.26
RBM39-206ENST00000403542 MYH3P11055 1940 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 HERVK_113P62684 666 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 PPARDQ03181 441 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
RBM39-206ENST00000403542 MB21D1Q8N884 522 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 OR8K1Q8NGG5 319 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 DCCP43146 1447 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 DIXDC1Q155Q3 683 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 RCSD1Q6JBY9 416 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 WDR59Q6PJI9 974 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 CSGALNACT2Q8N6G5 542 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 ANKRD13CQ8N6S4 541 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
RBM39-206ENST00000403542 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 BMP15O95972 392 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 CXCR5P32302 372 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 MKNK2Q9HBH9 465 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 MAGEC2Q9UBF1 373 aaPredicted RBP13.44□□□□□ -0.26
RBM39-206ENST00000403542 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 CALM1P0DP23 149 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 CALM2P0DP24 149 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 CALM3P0DP25 149 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 USP5P45974 858 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 TBC1D8BQ0IIM8 1120 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms