RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ZNF365Q70YC5 407 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ATXN2LQ8WWM7 1075 aaKnown RBP14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 VWCEQ96DN2 955 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 TSEN34Q9BSV6 310 aaKnown RBP14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 STARD7Q9NQZ5 370 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 YBX2Q9Y2T7 364 aaKnown RBP14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 RIPK3Q9Y572 518 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 MUC6Q6W4X9 2439 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 WDR46O15213 610 aaKnown RBP14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 EEF2P13639 858 aaKnown RBP14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 STAT3P40763 770 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CRNKL1Q9BZJ0 848 aaKnown RBP14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ARMT1Q9H993 441 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 THEGQ9P2T0 379 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 PPP1R9AQ9ULJ8 1098 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 EXOC6BQ9Y2D4 811 aa14.42□□□□□ -0.1
SPTLC1P3-201ENST00000403408 UMODL1Q5DID0 1318 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 DNAJC25-GNG10A0A024R161 153 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 DCDC2CA8MYV0 355 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 PTGS1P23219 599 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 PLA2G5P39877 138 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CDK8P49336 464 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 AACSQ86V21 672 aa14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 UHRF1Q96T88 793 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 NUP88Q99567 741 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 GREB1LQ9C091 1923 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1P3-201ENST00000403408 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CYP2C18P33260 490 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 FAM83BQ5T0W9 1011 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CEP85Q6P2H3 762 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 FAM126BQ8IXS8 530 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 PPP1R12CQ9BZL4 782 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 KATNBL1Q9H079 304 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 NKX2-4Q9H2Z4 354 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 IL1RAPL2Q9NP60 686 aa14.4□□□□□ -0.1
SPTLC1P3-201ENST00000403408 DUSP11O75319 330 aaKnown RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CD4P01730 458 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ASGR1P07306 291 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 BMP1P13497 986 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CST5P28325 142 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 MRPS5P82675 430 aaKnown RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 PPIGQ13427 754 aaKnown RBP eCLIP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 KCTD2Q14681 263 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TMED8Q6PL24 325 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CCDC129Q6ZRS4 1044 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 GAS2L1Q99501 681 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 UPF3AQ9H1J1 476 aaKnown RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ZHX1Q9UKY1 873 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ASTN1O14525 1302 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ELP1O95163 1332 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SYNGAP1Q96PV0 1343 aa14.39□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ARVCFO00192 962 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 GOLIM4O00461 696 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 MYOGP15173 224 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 IGFBP4P22692 258 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TFF2Q03403 129 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 C16orf86Q6ZW13 317 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 NUP133Q8WUM0 1156 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CNPY2Q9Y2B0 182 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 DDX49Q9Y6V7 483 aaKnown RBP14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 GRIN2DO15399 1336 aa14.38□□□□□ -0.11
SPTLC1P3-201ENST00000403408 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 USP17L21D6R901 530 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 MBD4O95243 580 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 RABGGTBP53611 331 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 GJA9P57773 515 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ACVR2BQ13705 512 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ZKSCAN2Q63HK3 967 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 IL23AQ9NPF7 189 aa14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.37□□□□□ -0.11
SPTLC1P3-201ENST00000403408 WDFY4Q6ZS81 3184 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 C6orf222P0C671 652 aaPredicted RBP14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 BEX3Q00994 111 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CCDC144BQ3MJ40 725 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SNRNP48Q6IEG0 339 aaKnown RBP14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 MSL3Q8N5Y2 521 aaKnown RBP14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SLC43A3Q8NBI5 491 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CCDC17Q96LX7 622 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 GLT1D1Q96MS3 346 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TRIOO75962 3097 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 RFXAPO00287 272 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ADD2P35612 726 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 KCNQ1P51787 676 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 NKX3-2P78367 333 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms