RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 PRRT2Q7Z6L0 340 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ALYREFQ86V81 257 aaKnown RBP7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 KCTD17Q8N5Z5 321 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 RUFY2Q8WXA3 655 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PPM1EQ8WY54 764 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 INTS4Q96HW7 963 aaKnown RBP7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SNX27Q96L92 541 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ASB2Q96Q27 587 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 FAM117AQ9C073 453 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PALD1Q9ULE6 856 aa7.57□□□□□ -1.2
SMARCE1P6-201ENST00000398372 GOLIM4O00461 696 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 DPYSL4O14531 572 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 HLA-DOAP06340 250 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 XRCC6P12956 609 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PDE6AP16499 860 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ATN1P54259 1190 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SMAD3P84022 425 aaKnown RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CACNB2Q08289 660 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SPP2Q13103 211 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TREML2Q5T2D2 321 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SLC9C2Q5TAH2 1124 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TMED8Q6PL24 325 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CERS3Q8IU89 383 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 FOXP4Q8IVH2 680 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CRACR2BQ8N4Y2 399 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 EDC3Q96F86 508 aaKnown RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SENP6Q9GZR1 1112 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 BOLA2Q9H3K6 86 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 DNAJC18Q9H819 358 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 FRMPD3Q5JV73 1810 aa7.56□□□□□ -1.2
SMARCE1P6-201ENST00000398372 NAV1Q8NEY1 1877 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 BAZ2AQ9UIF9 1905 aaKnown RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 USP17L5A8MUK1 530 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TRIM6-TRIM34B2RNG4 842 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SGSM2O43147 1006 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TRAK2O60296 914 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 GDF11O95390 407 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ATP5JP18859 108 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CYP2B6P20813 491 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 MCM5P33992 734 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 HSPA4P34932 840 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 EPHB4P54760 987 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 JAG1P78504 1218 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SHROOM1Q2M3G4 852 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ZNF280CQ8ND82 737 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SMCR8Q8TEV9 937 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ATXN2LQ8WWM7 1075 aaKnown RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 BADQ92934 168 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TNPO1Q92973 898 aaKnown RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ZNF830Q96NB3 372 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 UHRF1Q96T88 793 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 RIOK1Q9BRS2 568 aaKnown RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 LRFN3Q9BTN0 628 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 EPHX3Q9H6B9 360 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ECHDC1Q9NTX5 307 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PAG1Q9NWQ8 432 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 GEMIN8Q9NWZ8 242 aaKnown RBP7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SLC45A1Q9Y2W3 748 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 LOC285556D6RIA3 1793 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CHD9Q3L8U1 2897 aa7.55□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ZNF532Q9HCE3 1301 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TCRBV5S4A2TA0A5A2 114 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CD2BP2O95400 341 aaKnown RBP7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ASNSP08243 561 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 HMGCS2P54868 508 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CUL4AQ13619 759 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CCL14Q16627 93 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 DNTTIP2Q5QJE6 756 aaKnown RBP7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SH3RF1Q7Z6J0 888 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 RILPL2Q969X0 211 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 EVI5LQ96CN4 794 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CCDC97Q96F63 343 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 HAUS7Q99871 368 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 WDR18Q9BV38 432 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 AS3MTQ9HBK9 375 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ANO2Q9NQ90 1003 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 AGTPBP1Q9UPW5 1226 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 MYH8P13535 1937 aa7.54□□□□□ -1.2
SMARCE1P6-201ENST00000398372 TRIM43BA6NCK2 446 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 GH2P01242 217 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CHGBP05060 677 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 POLR3DP05423 398 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ITGB8P26012 769 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 ADD2P35612 726 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 PLCD1P51178 756 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 RTP1P59025 263 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 CCDC85BQ15834 202 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 FAM110CQ1W6H9 321 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 KLHL40Q2TBA0 621 aa7.53□□□□□ -1.2
SMARCE1P6-201ENST00000398372 SH3D19Q5HYK7 790 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms