RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 KCTD2Q14681 263 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 GJC2Q5T442 439 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-207ENST00000397024 SLFN13Q68D06 897 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 SNRNP48Q6IEG0 339 aaKnown RBP22.39■■□□□ 1.17
MCF2L-207ENST00000397024 CPXCR1Q8N123 301 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 KIFC2Q96AC6 838 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 CHMP4CQ96CF2 233 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 TEX13BQ9BXU2 312 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 RWDD1Q9H446 243 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-207ENST00000397024 IL17RBQ9NRM6 502 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 SYNPO2Q9UMS6 1093 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 NMT2O60551 498 aa22.38■■□□□ 1.17
MCF2L-207ENST00000397024 TAL1P17542 331 aaPredicted RBP22.38■■□□□ 1.17
MCF2L-207ENST00000397024 SLC4A3P48751 1232 aa22.38■■□□□ 1.17
MCF2L-207ENST00000397024 ALX1Q15699 326 aa22.38■■□□□ 1.17
MCF2L-207ENST00000397024 RAVER2Q9HCJ3 691 aaKnown RBP22.38■■□□□ 1.17
MCF2L-207ENST00000397024 ANAPC4Q9UJX5 808 aa22.38■■□□□ 1.17
MCF2L-207ENST00000397024 FEM1BQ9UK73 627 aa22.38■■□□□ 1.17
MCF2L-207ENST00000397024 ATP2A1O14983 1001 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 ZBED4O75132 1171 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 FGAP02671 866 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 BMP3P12645 472 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 NMIQ13287 307 aaPredicted RBP22.37■■□□□ 1.17
MCF2L-207ENST00000397024 MCMDC2Q4G0Z9 681 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 TINF2Q9BSI4 451 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 SLC38A10Q9HBR0 1119 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 DIS3Q9Y2L1 958 aaKnown RBP22.37■■□□□ 1.17
MCF2L-207ENST00000397024 PLXNA1Q9UIW2 1896 aa22.37■■□□□ 1.17
MCF2L-207ENST00000397024 DNM1LO00429 736 aa22.36■■□□□ 1.17
MCF2L-207ENST00000397024 COPB2P35606 906 aa22.36■■□□□ 1.17
MCF2L-207ENST00000397024 MAGEA10P43363 369 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-207ENST00000397024 ATN1P54259 1190 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-207ENST00000397024 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-207ENST00000397024 CHD1LQ86WJ1 897 aa22.36■■□□□ 1.17
MCF2L-207ENST00000397024 PLEKHM2Q8IWE5 1019 aa22.36■■□□□ 1.17
MCF2L-207ENST00000397024 DNAJC25-GNG10A0A024R161 153 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 TRIM6-TRIM34B2RNG4 842 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 TMEM232C9JQI7 657 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 SOX1O00570 391 aaPredicted RBP22.35■■□□□ 1.17
MCF2L-207ENST00000397024 FGRP09769 529 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 MCCP23508 829 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 BMP8BP34820 402 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 NUCB1Q02818 461 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 RASGRP2Q7LDG7 609 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 ARRDC4Q8NCT1 418 aa22.35■■□□□ 1.17
MCF2L-207ENST00000397024 TSPY2A6NKD2 308 aa22.34■■□□□ 1.17
MCF2L-207ENST00000397024 RANBP6O60518 1105 aaKnown RBP22.34■■□□□ 1.17
MCF2L-207ENST00000397024 ZNF865P0CJ78 1059 aaPredicted RBP22.34■■□□□ 1.17
MCF2L-207ENST00000397024 HSPD1P10809 573 aaKnown RBP22.34■■□□□ 1.17
MCF2L-207ENST00000397024 RILPL2Q969X0 211 aa22.34■■□□□ 1.17
MCF2L-207ENST00000397024 GMCL1Q96IK5 515 aa22.34■■□□□ 1.17
MCF2L-207ENST00000397024 STX8Q9UNK0 236 aa22.34■■□□□ 1.17
MCF2L-207ENST00000397024 A0A1W2PPC1 479 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 ORC4O43929 436 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 MYCNP04198 464 aaPredicted RBP22.33■■□□□ 1.17
MCF2L-207ENST00000397024 NOVP48745 357 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 LRRC41Q15345 812 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 TICAM2Q86XR7 235 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 DDX11Q96FC9 970 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 NRBP1Q9UHY1 535 aa22.33■■□□□ 1.17
MCF2L-207ENST00000397024 CTDP1Q9Y5B0 961 aaPredicted RBP22.33■■□□□ 1.17
MCF2L-207ENST00000397024 LAMA2P24043 3122 aaKnown RBP22.32■■□□□ 1.16
MCF2L-207ENST00000397024 SNAI1O95863 264 aaPredicted RBP22.32■■□□□ 1.16
MCF2L-207ENST00000397024 KCTD1Q719H9 257 aa22.32■■□□□ 1.16
MCF2L-207ENST00000397024 STAG1Q8WVM7 1258 aa22.32■■□□□ 1.16
MCF2L-207ENST00000397024 FGD4Q96M96 766 aa22.32■■□□□ 1.16
MCF2L-207ENST00000397024 OSBPL3Q9H4L5 887 aa22.32■■□□□ 1.16
MCF2L-207ENST00000397024 ISY1Q9ULR0 285 aaKnown RBP22.32■■□□□ 1.16
MCF2L-207ENST00000397024 ZNF536O15090 1300 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 SDSP20132 328 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 ADCYAP1R1P41586 468 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 SLC1A4P43007 532 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 SNAP25P60880 206 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 RCSD1Q6JBY9 416 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.31■■□□□ 1.16
MCF2L-207ENST00000397024 CHURC1Q8WUH1 139 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 LENG1Q96BZ8 264 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-207ENST00000397024 LRCH3Q96II8 777 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
MCF2L-207ENST00000397024 SUPT16HQ9Y5B9 1047 aaKnown RBP22.31■■□□□ 1.16
MCF2L-207ENST00000397024 KBTBD13C9JR72 458 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 STAT2P52630 851 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 OAZ1P54368 228 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 RTP1P59025 263 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 HAND2P61296 217 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 MAMDC4Q6UXC1 1216 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 SLC39A5Q6ZMH5 540 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 FERMT2Q96AC1 680 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 MTMR7Q9Y216 660 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 CCDC171Q6TFL3 1326 aa22.3■■□□□ 1.16
MCF2L-207ENST00000397024 PLA2G6O60733 806 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 PGK1P00558 417 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 MDM2Q00987 491 aaPredicted RBP22.29■■□□□ 1.16
MCF2L-207ENST00000397024 RRP12Q5JTH9 1297 aaKnown RBP22.29■■□□□ 1.16
MCF2L-207ENST00000397024 PPP4R3BQ5MIZ7 849 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 FAM160B2Q86V87 743 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 ANKRD35Q8N283 1001 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 CHST13Q8NET6 341 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 XPNPEP3Q9NQH7 507 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms