RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PTPROQ16827 1216 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 TRIM42Q8IWZ5 723 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 PRPSAP1Q14558 356 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 KIAA2013Q8IYS2 634 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 OSCARQ8IYS5 282 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 SETDB2Q96T68 719 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 DESI2Q9BSY9 194 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 INTS9Q9NV88 658 aaKnown RBP11.27□□□□□ -0.6
COL4A4-201ENST00000396625 HYOU1Q9Y4L1 999 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 TTI1O43156 1089 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 GPC4O75487 556 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 SRGAP2BP0DMP2 458 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 ARHGDIAP52565 204 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.6
COL4A4-201ENST00000396625 TTBK2Q6IQ55 1244 aa11.27□□□□□ -0.6
COL4A4-201ENST00000396625 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.6
COL4A4-201ENST00000396625 CDV3Q9UKY7 258 aaKnown RBP11.27□□□□□ -0.6
COL4A4-201ENST00000396625 IFNAR2P48551 515 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 SEPT2Q15019 361 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 C6orf118Q5T5N4 469 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 TMCO5AQ8N6Q1 288 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 GLT8D2Q9H1C3 349 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 BIN2Q9UBW5 565 aaPredicted RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 RMDN2Q96LZ7 410 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 DACH2Q96NX9 599 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 CDK13Q14004 1512 aaKnown RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 KDM1AO60341 852 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 ATG16L1Q676U5 607 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 PICK1Q9NRD5 415 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 DNM3Q9UQ16 869 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 LDHBP07195 334 aaKnown RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 CAPN9O14815 690 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 GRAMD1BQ3KR37 738 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 BBOF1Q8ND07 529 aa11.27□□□□□ -0.61
COL4A4-201ENST00000396625 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.61
COL4A4-201ENST00000396625 PDE6CP51160 858 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 KAZNQ674X7 775 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 HERC4Q5GLZ8 1057 aaPredicted RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 ANGPTL8Q6UXH0 198 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 NR1H4Q96RI1 486 aaPredicted RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 DDIT3P35638 169 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 PSMC1P62191 440 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 GLE1Q53GS7 698 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 MCUQ8NE86 351 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 EIF3CLB5ME19 914 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 LRMPQ12912 555 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 IL16Q14005 1332 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 TTC38Q5R3I4 469 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 EIF3CQ99613 913 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 ING2Q9H160 280 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 CNOT10Q9H9A5 744 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 M0QZ92 97 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 CCDC51Q96ER9 411 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 TEX12Q9BXU0 123 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 HMGXB3Q12766 1538 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 SGK1O00141 431 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 PARD3BQ8TEW8 1205 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 LLPHQ9BRT6 129 aaKnown RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 NEUROG2Q9H2A3 272 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 ANKRD36BQ8N2N9 1353 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 POC1B-GALNT4F8VUJ3 575 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 BUB1O43683 1085 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 PDE1BQ01064 536 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 GUCY2DQ02846 1103 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 MYLK4Q86YV6 388 aaPredicted RBP11.26□□□□□ -0.61
COL4A4-201ENST00000396625 DPH5Q9H2P9 285 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 MSH6P52701 1360 aa11.26□□□□□ -0.61
COL4A4-201ENST00000396625 SLC4A1P02730 911 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 STAT1P42224 750 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 PNOCQ13519 176 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 GDAP1Q8TB36 358 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 STRIP2Q9ULQ0 834 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 ZNF449Q6P9G9 518 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 ATP6V1E2Q96A05 226 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 THOC2Q8NI27 1593 aaKnown RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 PSDA5PKW4 1024 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms