RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
CXCL12-204ENST00000395793 LTBP2Q14767 1821 aa21.45■■□□□ 1.02
CXCL12-204ENST00000395793 ATP2A1O14983 1001 aa21.44■■□□□ 1.02
CXCL12-204ENST00000395793 TAL1P17542 331 aaPredicted RBP21.44■■□□□ 1.02
CXCL12-204ENST00000395793 RASGRP2Q7LDG7 609 aa21.44■■□□□ 1.02
CXCL12-204ENST00000395793 PRPF38AQ8NAV1 312 aaKnown RBP21.44■■□□□ 1.02
CXCL12-204ENST00000395793 KIFC2Q96AC6 838 aa21.44■■□□□ 1.02
CXCL12-204ENST00000395793 SYNPO2Q9UMS6 1093 aa21.44■■□□□ 1.02
CXCL12-204ENST00000395793 LAMA3Q16787 3333 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 COPB2P35606 906 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 ATN1P54259 1190 aaPredicted RBP21.43■■□□□ 1.02
CXCL12-204ENST00000395793 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 SMC5Q8IY18 1101 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 CPXCR1Q8N123 301 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 LRCH3Q96II8 777 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 TINF2Q9BSI4 451 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 SLC38A10Q9HBR0 1119 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 RAVER2Q9HCJ3 691 aaKnown RBP21.43■■□□□ 1.02
CXCL12-204ENST00000395793 IL17RBQ9NRM6 502 aa21.43■■□□□ 1.02
CXCL12-204ENST00000395793 DIS3Q9Y2L1 958 aaKnown RBP21.43■■□□□ 1.02
CXCL12-204ENST00000395793 DNAJC25-GNG10A0A024R161 153 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 NMT2O60551 498 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 SLC3A2P08195 630 aaKnown RBP21.42■■□□□ 1.02
CXCL12-204ENST00000395793 ZNF589Q86UQ0 364 aaPredicted RBP21.42■■□□□ 1.02
CXCL12-204ENST00000395793 CHMP4CQ96CF2 233 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 HELLSQ9NRZ9 838 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 ANAPC4Q9UJX5 808 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 FEM1BQ9UK73 627 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 DNAH12Q6ZR08 3092 aa21.42■■□□□ 1.02
CXCL12-204ENST00000395793 IGHDP01880 384 aa21.41■■□□□ 1.02
CXCL12-204ENST00000395793 BMP3P12645 472 aa21.41■■□□□ 1.02
CXCL12-204ENST00000395793 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
CXCL12-204ENST00000395793 NMIQ13287 307 aaPredicted RBP21.41■■□□□ 1.02
CXCL12-204ENST00000395793 LRRC41Q15345 812 aa21.41■■□□□ 1.02
CXCL12-204ENST00000395793 EXOC6Q8TAG9 804 aa21.41■■□□□ 1.02
CXCL12-204ENST00000395793 LENG1Q96BZ8 264 aaPredicted RBP21.41■■□□□ 1.02
CXCL12-204ENST00000395793 FGD4Q96M96 766 aa21.41■■□□□ 1.02
CXCL12-204ENST00000395793 ZBED4O75132 1171 aa21.4■■□□□ 1.02
CXCL12-204ENST00000395793 ZNF865P0CJ78 1059 aaPredicted RBP21.4■■□□□ 1.02
CXCL12-204ENST00000395793 RTP1P59025 263 aa21.4■■□□□ 1.02
CXCL12-204ENST00000395793 ALX1Q15699 326 aa21.4■■□□□ 1.02
CXCL12-204ENST00000395793 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
CXCL12-204ENST00000395793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.4■■□□□ 1.02
CXCL12-204ENST00000395793 ARRDC4Q8NCT1 418 aa21.4■■□□□ 1.02
CXCL12-204ENST00000395793 NRBP1Q9UHY1 535 aa21.4■■□□□ 1.02
CXCL12-204ENST00000395793 TSPY2A6NKD2 308 aa21.39■■□□□ 1.01
CXCL12-204ENST00000395793 TMEM232C9JQI7 657 aa21.39■■□□□ 1.01
CXCL12-204ENST00000395793 MYCNP04198 464 aaPredicted RBP21.39■■□□□ 1.01
CXCL12-204ENST00000395793 FGRP09769 529 aa21.39■■□□□ 1.01
CXCL12-204ENST00000395793 GMCL1Q96IK5 515 aa21.39■■□□□ 1.01
CXCL12-204ENST00000395793 LCTP09848 1927 aa21.39■■□□□ 1.01
CXCL12-204ENST00000395793 LAMA4Q16363 1823 aa21.39■■□□□ 1.01
CXCL12-204ENST00000395793 ZNF536O15090 1300 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 KBTBD13C9JR72 458 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 ORC4O43929 436 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 SNAI1O95863 264 aaPredicted RBP21.38■■□□□ 1.01
CXCL12-204ENST00000395793 FGAP02671 866 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 MCCP23508 829 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 NOVP48745 357 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
CXCL12-204ENST00000395793 AAMPQ13685 434 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 MCMDC2Q4G0Z9 681 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 STX8Q9UNK0 236 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 LRRC37A2A6NM11 1700 aa21.38■■□□□ 1.01
CXCL12-204ENST00000395793 RANBP6O60518 1105 aaKnown RBP21.37■■□□□ 1.01
CXCL12-204ENST00000395793 PGK1P00558 417 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 HSPD1P10809 573 aaKnown RBP21.37■■□□□ 1.01
CXCL12-204ENST00000395793 ADCYAP1R1P41586 468 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 SNX17Q15036 470 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 SLC39A5Q6ZMH5 540 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 KCTD1Q719H9 257 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 PLEKHM2Q8IWE5 1019 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 FERMT2Q96AC1 680 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 DDX11Q96FC9 970 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 UBE2OQ9C0C9 1292 aaKnown RBP21.37■■□□□ 1.01
CXCL12-204ENST00000395793 XPNPEP3Q9NQH7 507 aa21.37■■□□□ 1.01
CXCL12-204ENST00000395793 CTDP1Q9Y5B0 961 aaPredicted RBP21.37■■□□□ 1.01
CXCL12-204ENST00000395793 ZMYM6O95789 1325 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 TRIM6-TRIM34B2RNG4 842 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 RARBP10826 455 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 STAT2P52630 851 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 OAZ1P54368 228 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 MAMDC4Q6UXC1 1216 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 TDHQ8IZJ6 230 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 STAG1Q8WVM7 1258 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 RWDD1Q9H446 243 aaPredicted RBP21.36■■□□□ 1.01
CXCL12-204ENST00000395793 ISY1Q9ULR0 285 aaKnown RBP21.36■■□□□ 1.01
CXCL12-204ENST00000395793 ATP11BQ9Y2G3 1177 aa21.36■■□□□ 1.01
CXCL12-204ENST00000395793 CCDC171Q6TFL3 1326 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 SYNGAP1Q96PV0 1343 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 AKR1A1P14550 325 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 SLC1A4P43007 532 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 SNAP25P60880 206 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 NUCB1Q02818 461 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 TRIM60Q495X7 471 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 FAM160B2Q86V87 743 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 MSL3Q8N5Y2 521 aaKnown RBP21.35■■□□□ 1.01
CXCL12-204ENST00000395793 CHST13Q8NET6 341 aa21.35■■□□□ 1.01
CXCL12-204ENST00000395793 RILPL2Q969X0 211 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms