RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 SLC1A4P43007 532 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 CCDC178Q5BJE1 867 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 PRAMEF18Q5VWM3 479 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 RBM43Q6ZSC3 357 aaKnown RBP23.23■■□□□ 1.31
PRKCD-202ENST00000394729 BARHL2Q9NY43 387 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 PCDHA6Q9UN73 950 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 PCDHA8Q9Y5H6 950 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 GOLGA6L19H0YKK7 550 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 STX1AQ16623 288 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 SAMD7Q7Z3H4 446 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.23■■□□□ 1.31
PRKCD-202ENST00000394729 ZBTB22O15209 634 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 ABCB5Q2M3G0 1257 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 METTL16Q86W50 562 aaKnown RBP23.23■■□□□ 1.31
PRKCD-202ENST00000394729 FOXP4Q8IVH2 680 aaPredicted RBP23.23■■□□□ 1.31
PRKCD-202ENST00000394729 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 SLC16A10Q8TF71 515 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 GJA10Q969M2 543 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.23■■□□□ 1.31
PRKCD-202ENST00000394729 ZNRF3Q9ULT6 936 aa23.23■■□□□ 1.31
PRKCD-202ENST00000394729 COBLO75128 1261 aa23.22■■□□□ 1.31
PRKCD-202ENST00000394729 MTFR1LQ9H019 292 aa23.22■■□□□ 1.31
PRKCD-202ENST00000394729 FAM13BQ9NYF5 915 aa23.22■■□□□ 1.31
PRKCD-202ENST00000394729 SWAP70Q9UH65 585 aa23.22■■□□□ 1.31
PRKCD-202ENST00000394729 USH1GQ495M9 461 aa23.22■■□□□ 1.31
PRKCD-202ENST00000394729 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
PRKCD-202ENST00000394729 C17orf53Q8N3J3 647 aaPredicted RBP23.21■■□□□ 1.31
PRKCD-202ENST00000394729 PDLIM2Q96JY6 352 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 PCDHA5Q9Y5H7 936 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 NFKBIEO00221 500 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 TBC1D10BQ4KMP7 808 aaPredicted RBP23.21■■□□□ 1.31
PRKCD-202ENST00000394729 IDI2Q9BXS1 227 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 HDAC9Q9UKV0 1011 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 CEP131Q9UPN4 1083 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 HPSEQ9Y251 543 aa23.21■■□□□ 1.31
PRKCD-202ENST00000394729 CTAGE5O15320 804 aa23.2■■□□□ 1.3
PRKCD-202ENST00000394729 CCNT1O60563 726 aaKnown RBP23.2■■□□□ 1.3
PRKCD-202ENST00000394729 PRKCSHP14314 528 aaPredicted RBP23.2■■□□□ 1.3
PRKCD-202ENST00000394729 IL17AQ16552 155 aa23.2■■□□□ 1.3
PRKCD-202ENST00000394729 PSMD1Q99460 953 aa23.2■■□□□ 1.3
PRKCD-202ENST00000394729 DHX36Q9H2U1 1008 aaKnown RBP23.2■■□□□ 1.3
PRKCD-202ENST00000394729 SRPRBQ9Y5M8 271 aaKnown RBP23.2■■□□□ 1.3
PRKCD-202ENST00000394729 KRBA2Q6ZNG9 492 aa23.2■■□□□ 1.3
PRKCD-202ENST00000394729 JMJD4Q9H9V9 463 aa23.2■■□□□ 1.3
PRKCD-202ENST00000394729 PPP1R11O60927 126 aaPredicted RBP23.19■■□□□ 1.3
PRKCD-202ENST00000394729 VIL1P09327 827 aaKnown RBP23.19■■□□□ 1.3
PRKCD-202ENST00000394729 CALML3P27482 149 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 ZNF543Q08ER8 600 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 SLFN13Q68D06 897 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 NRBP1Q9UHY1 535 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 TNNI2P48788 182 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 SIAH1Q8IUQ4 282 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 ACER1Q8TDN7 264 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 BLZF1Q9H2G9 400 aa23.19■■□□□ 1.3
PRKCD-202ENST00000394729 A0A1W2PRG0 241 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 ANO10Q9NW15 660 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 MYH8P13535 1937 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 WNT10BO00744 389 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 DGKZQ13574 1117 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 DHX8Q14562 1220 aaKnown RBP23.18■■□□□ 1.3
PRKCD-202ENST00000394729 CEP57L1Q8IYX8 460 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 SPZ1Q9BXG8 430 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 DLEC1Q9Y238 1755 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 IGKV6D-41A0A0C4DH26 115 aa23.18■■□□□ 1.3
PRKCD-202ENST00000394729 SMYD4Q8IYR2 804 aaPredicted RBP23.18■■□□□ 1.3
PRKCD-202ENST00000394729 GLIS2Q9BZE0 524 aaPredicted RBP23.18■■□□□ 1.3
PRKCD-202ENST00000394729 F5H6K3 240 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 IGSF3O75054 1194 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
PRKCD-202ENST00000394729 KLRC3Q07444 240 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 CIAPIN1Q6FI81 312 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 CCDC148Q8NFR7 591 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 TBCKQ8TEA7 893 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L15C9J2P7 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L13C9JLJ4 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L11C9JVI0 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L18D6R9N7 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L22D6RA61 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L17D6RBQ6 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L19D6RCP7 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L20D6RJB6 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 MSNP26038 577 aaKnown RBP23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L24Q0WX57 530 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 KARSQ15046 597 aaKnown RBP23.17■■□□□ 1.3
PRKCD-202ENST00000394729 USP17L6PQ6QN14 398 aa23.17■■□□□ 1.3
PRKCD-202ENST00000394729 KLHL10Q6JEL2 608 aa23.16■■□□□ 1.3
PRKCD-202ENST00000394729 DHX40Q8IX18 779 aaKnown RBP23.16■■□□□ 1.3
PRKCD-202ENST00000394729 TRMT44Q8IYL2 757 aaKnown RBP23.16■■□□□ 1.3
PRKCD-202ENST00000394729 TMEM232C9JQI7 657 aa23.16■■□□□ 1.3
PRKCD-202ENST00000394729 PRELPP51888 382 aa23.16■■□□□ 1.3
PRKCD-202ENST00000394729 IQCB1Q15051 598 aa23.16■■□□□ 1.3
PRKCD-202ENST00000394729 GMLQ99445 158 aa23.16■■□□□ 1.3
PRKCD-202ENST00000394729 HDLBPQ00341 1268 aaKnown RBP23.15■■□□□ 1.3
PRKCD-202ENST00000394729 REXO1Q8N1G1 1221 aaKnown RBP23.15■■□□□ 1.3
PRKCD-202ENST00000394729 KANSL2Q9H9L4 492 aa23.15■■□□□ 1.3
PRKCD-202ENST00000394729 C6orf50Q9HD87 102 aa23.15■■□□□ 1.3
PRKCD-202ENST00000394729 UVSSAQ2YD98 709 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms