RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CPXCR1Q8N123 301 aa19.74■□□□□ 0.75
PTPRK-208ENST00000392449 PLIN4Q96Q06 1357 aa19.74■□□□□ 0.75
PTPRK-208ENST00000392449 A0A1W2PPC1 479 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 TTLL1O95922 423 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 BMP8BP34820 402 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 MDM2Q00987 491 aaPredicted RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 PDE4BQ07343 736 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 HDAC1Q13547 482 aaPredicted RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 RASGRP2Q7LDG7 609 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 NEDD1Q8NHV4 660 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 MKL1Q969V6 931 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 LENG1Q96BZ8 264 aaPredicted RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 TEX13BQ9BXU2 312 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 ZNF287Q9HBT7 754 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 RAVER2Q9HCJ3 691 aaKnown RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 NMT2O60551 498 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 PRPF38AQ8NAV1 312 aaKnown RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 FAM227BQ96M60 508 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 LNPKQ9C0E8 428 aa19.73■□□□□ 0.75
PTPRK-208ENST00000392449 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
PTPRK-208ENST00000392449 SLFN13Q68D06 897 aa19.72■□□□□ 0.75
PTPRK-208ENST00000392449 EVI5LQ96CN4 794 aa19.72■□□□□ 0.75
PTPRK-208ENST00000392449 TINF2Q9BSI4 451 aa19.72■□□□□ 0.75
PTPRK-208ENST00000392449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTPRK-208ENST00000392449 A0A0D9SFI3 127 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 RTP1P59025 263 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 LRRC41Q15345 812 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 ARRDC4Q8NCT1 418 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 GMCL1P1Q8NEA9 526 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 FERMT2Q96AC1 680 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 UBE2OQ9C0C9 1292 aaKnown RBP19.71■□□□□ 0.75
PTPRK-208ENST00000392449 ATP11BQ9Y2G3 1177 aa19.71■□□□□ 0.75
PTPRK-208ENST00000392449 LAMA2P24043 3122 aaKnown RBP19.7■□□□□ 0.74
PTPRK-208ENST00000392449 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
PTPRK-208ENST00000392449 SLC3A2P08195 630 aaKnown RBP19.7■□□□□ 0.74
PTPRK-208ENST00000392449 ADCYAP1R1P41586 468 aa19.7■□□□□ 0.74
PTPRK-208ENST00000392449 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
PTPRK-208ENST00000392449 SLC38A10Q9HBR0 1119 aa19.7■□□□□ 0.74
PTPRK-208ENST00000392449 IL17RBQ9NRM6 502 aa19.7■□□□□ 0.74
PTPRK-208ENST00000392449 LTBP2Q14767 1821 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 MCM3APO60318 1980 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 TMEM232C9JQI7 657 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 ZBED4O75132 1171 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 PGK1P00558 417 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 ZNF865P0CJ78 1059 aaPredicted RBP19.69■□□□□ 0.74
PTPRK-208ENST00000392449 BMP3P12645 472 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 COPB2P35606 906 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 HOMER2Q9NSB8 354 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 FEM1BQ9UK73 627 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 MTMR7Q9Y216 660 aa19.69■□□□□ 0.74
PTPRK-208ENST00000392449 DIS3Q9Y2L1 958 aaKnown RBP19.69■□□□□ 0.74
PTPRK-208ENST00000392449 CTDP1Q9Y5B0 961 aaPredicted RBP19.69■□□□□ 0.74
PTPRK-208ENST00000392449 TSPY2A6NKD2 308 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 MCCP23508 829 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 SNAP25P60880 206 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 TRIM60Q495X7 471 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 SLC39A5Q6ZMH5 540 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 ZNF589Q86UQ0 364 aaPredicted RBP19.68■□□□□ 0.74
PTPRK-208ENST00000392449 TDHQ8IZJ6 230 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 DDX11Q96FC9 970 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 XPNPEP3Q9NQH7 507 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 STX8Q9UNK0 236 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 COL6A3P12111 3177 aa19.68■□□□□ 0.74
PTPRK-208ENST00000392449 DNAJC25-GNG10A0A024R161 153 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 ATP2A1O14983 1001 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 IGHDP01880 384 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 NMIQ13287 307 aaPredicted RBP19.67■□□□□ 0.74
PTPRK-208ENST00000392449 KCTD1Q719H9 257 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 FGD4Q96M96 766 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 SYNPO2Q9UMS6 1093 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 RANBP6O60518 1105 aaKnown RBP19.67■□□□□ 0.74
PTPRK-208ENST00000392449 SNAI1O95863 264 aaPredicted RBP19.67■□□□□ 0.74
PTPRK-208ENST00000392449 RARBP10826 455 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 CACNB1Q02641 598 aaPredicted RBP19.67■□□□□ 0.74
PTPRK-208ENST00000392449 IKQ13123 557 aaPredicted RBP19.67■□□□□ 0.74
PTPRK-208ENST00000392449 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 HELLSQ9NRZ9 838 aa19.67■□□□□ 0.74
PTPRK-208ENST00000392449 TRIM6-TRIM34B2RNG4 842 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 SLC1A4P43007 532 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 STAT2P52630 851 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 IRX5P78411 483 aaPredicted RBP19.66■□□□□ 0.74
PTPRK-208ENST00000392449 Q7L0L9 218 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 RILPL2Q969X0 211 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 AGBL1Q96MI9 1066 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 PRDM5Q9NQX1 630 aaPredicted RBP19.66■□□□□ 0.74
PTPRK-208ENST00000392449 NRBP1Q9UHY1 535 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 ANAPC4Q9UJX5 808 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 ZHX1Q9UKY1 873 aaPredicted RBP19.66■□□□□ 0.74
PTPRK-208ENST00000392449 CNPY2Q9Y2B0 182 aa19.66■□□□□ 0.74
PTPRK-208ENST00000392449 FGAP02671 866 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 HAND2P61296 217 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 MCMDC2Q4G0Z9 681 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 RRP12Q5JTH9 1297 aaKnown RBP19.65■□□□□ 0.74
PTPRK-208ENST00000392449 SMC5Q8IY18 1101 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 ANKRD35Q8N283 1001 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 TOMM22Q9NS69 142 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 ZNF536O15090 1300 aa19.65■□□□□ 0.74
PTPRK-208ENST00000392449 ADCY6O43306 1168 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms