RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 ACVR2BQ13705 512 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 TMEM67Q5HYA8 995 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 MSL3Q8N5Y2 521 aaKnown RBP11.77□□□□□ -0.53
TRAV18-201ENST00000390446 HLA-CQ95604 372 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 GOPCQ9HD26 462 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 SWAP70Q9UH65 585 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 TMX2Q9Y320 296 aa11.77□□□□□ -0.53
TRAV18-201ENST00000390446 VWA5AO00534 786 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
TRAV18-201ENST00000390446 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
TRAV18-201ENST00000390446 CSPP1Q1MSJ5 1256 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 CCDC144BQ3MJ40 725 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
TRAV18-201ENST00000390446 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 ANKRD35Q8N283 1001 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 ZNF512BQ96KM6 892 aaPredicted RBP11.76□□□□□ -0.53
TRAV18-201ENST00000390446 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
TRAV18-201ENST00000390446 FOCADQ5VW36 1801 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 KIF28PB7ZC32 967 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 IPO8O15397 1037 aaKnown RBP11.75□□□□□ -0.53
TRAV18-201ENST00000390446 ZEB2O60315 1214 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 GPR37L1O60883 481 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 AKR1B1P15121 316 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 CST5P28325 142 aaPredicted RBP11.75□□□□□ -0.53
TRAV18-201ENST00000390446 BEX3Q00994 111 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 CCSAPQ6IQ19 270 aaPredicted RBP11.75□□□□□ -0.53
TRAV18-201ENST00000390446 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
TRAV18-201ENST00000390446 DYNLL2Q96FJ2 89 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 AP5M1Q9H0R1 490 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 ABHD16BQ9H3Z7 469 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
TRAV18-201ENST00000390446 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 VCANP13611 3396 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
TRAV18-201ENST00000390446 TLL1O43897 1013 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 ZBED4O75132 1171 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 BCAR3O75815 825 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CABYRO75952 493 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CA3P07451 260 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CYP2D6P10635 497 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 ACTN1P12814 892 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 EEF2P13639 858 aaKnown RBP11.74□□□□□ -0.53
TRAV18-201ENST00000390446 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
TRAV18-201ENST00000390446 GJA9P57773 515 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 TNFAIP2Q03169 654 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 GABPAQ06546 454 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 TMED8Q6PL24 325 aaPredicted RBP11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CXCL17Q6UXB2 119 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 SDR42E1Q8WUS8 393 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 DBNLQ9UJU6 430 aaKnown RBP11.74□□□□□ -0.53
TRAV18-201ENST00000390446 PPP1R9AQ9ULJ8 1098 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 UMODL1Q5DID0 1318 aa11.74□□□□□ -0.53
TRAV18-201ENST00000390446 CD4P01730 458 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 EVX2Q03828 476 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 TTF1Q15361 905 aaPredicted RBP11.73□□□□□ -0.53
TRAV18-201ENST00000390446 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 CLUAP1Q96AJ1 413 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 SCLYQ96I15 445 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 SLF1Q9BQI6 1058 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 TRPV6Q9H1D0 765 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
TRAV18-201ENST00000390446 ISY1Q9ULR0 285 aaKnown RBP11.73□□□□□ -0.53
TRAV18-201ENST00000390446 ADAMTS5Q9UNA0 930 aa11.73□□□□□ -0.53
TRAV18-201ENST00000390446 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
TRAV18-201ENST00000390446 EYSQ5T1H1 3165 aa11.72□□□□□ -0.53
TRAV18-201ENST00000390446 MRE11P49959 708 aa11.72□□□□□ -0.53
TRAV18-201ENST00000390446 KRT40Q6A162 431 aa11.72□□□□□ -0.53
TRAV18-201ENST00000390446 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
TRAV18-201ENST00000390446 SIAH1Q8IUQ4 282 aa11.72□□□□□ -0.53
TRAV18-201ENST00000390446 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
TRAV18-201ENST00000390446 FTOQ9C0B1 505 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAV18-201ENST00000390446 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
TRAV18-201ENST00000390446 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
TRAV18-201ENST00000390446 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
TRAV18-201ENST00000390446 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 CDK8P49336 464 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 AACSQ86V21 672 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
TRAV18-201ENST00000390446 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
TRAV18-201ENST00000390446 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms