RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 RNF208Q9H0X6 261 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 MCM9Q9NXL9 1143 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 KIAA1522Q9P206 1035 aaPredicted RBP8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 CPA4Q9UI42 421 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 SERPINB13Q9UIV8 391 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 ZBTB21Q9ULJ3 1066 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 MYPNQ86TC9 1320 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 ROBO3Q96MS0 1386 aa8.42□□□□□ -1.06
TRAV12-3-201ENST00000390442 PARP14Q460N5 1801 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 FARP2O94887 1054 aaPredicted RBP8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 GDF11O95390 407 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 GJB1P08034 283 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 CCL5P13501 91 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 CTGFP29279 349 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 GCGRP47871 477 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 SPP2Q13103 211 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 TMEM164Q5U3C3 297 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 C17orf99Q6UX52 265 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 CCDC129Q6ZRS4 1044 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 ANKRD23Q86SG2 305 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 TTC6Q86TZ1 520 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 ZNF589Q86UQ0 364 aaPredicted RBP8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 SKAP1Q86WV1 359 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 LRRN4Q8WUT4 740 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 TRIM47Q96LD4 638 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 SLC4A4Q9Y6R1 1079 aa8.41□□□□□ -1.06
TRAV12-3-201ENST00000390442 MGAMO43451 1857 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 A0A1W2PPC1 479 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 A0A1W2PRG0 241 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 USP17L5A8MUK1 530 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 PDHXO00330 501 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 GH2P01242 217 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 ASNSP08243 561 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 FGRP09769 529 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 SDSP20132 328 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 PTPREP23469 700 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 CDK8P49336 464 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 BACE1P56817 501 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 NMIQ13287 307 aaPredicted RBP8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 KIAA1755Q5JYT7 1200 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 TREML2Q5T2D2 321 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 TTC22Q5TAA0 569 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 UBE2Q1Q7Z7E8 422 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 SP7Q8TDD2 431 aaPredicted RBP8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 ACER1Q8TDN7 264 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 U2AF1L4Q8WU68 220 aaKnown RBP8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 FSD1Q9BTV5 496 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 PRO3102Q9H379 93 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 PICK1Q9NRD5 415 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 HELLSQ9NRZ9 838 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
TRAV12-3-201ENST00000390442 IGKV6D-41A0A0C4DH26 115 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 TRIM75PA6NK02 468 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 TRIM6-TRIM34B2RNG4 842 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 HLA-DOAP06340 250 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 BCRP11274 1271 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 AKR1B1P15121 316 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 FCGRTP55899 365 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 PRKCZQ05513 592 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 SEPT2Q15019 361 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 ALX1Q15699 326 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 CERKLQ49MI3 558 aaPredicted RBP8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 PHLDB3Q6NSJ2 640 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 CLEC10AQ8IUN9 316 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 LRCH3Q96II8 777 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 C12orf42Q96LP6 360 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 PARK7Q99497 189 aaKnown RBP8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 NBPF3Q9H094 633 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 SWAP70Q9UH65 585 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 NOVA2Q9UNW9 492 aaKnown RBP8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 SLC45A1Q9Y2W3 748 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 CUL9Q8IWT3 2517 aa8.39□□□□□ -1.07
TRAV12-3-201ENST00000390442 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 CYP2C8P10632 490 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 HSPD1P10809 573 aaKnown RBP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 ZNF16P17020 682 aaPredicted RBP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 GNAT2P19087 354 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 RASA1P20936 1047 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 HOXA7P31268 230 aaPredicted RBP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 HMGCS2P54868 508 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 CRACR2BQ8N4Y2 399 aaPredicted RBP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 HLA-CQ95604 372 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 ZSWIM6Q9HCJ5 1215 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 INCENPQ9NQS7 918 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 ARPP21Q9UBL0 812 aaPredicted RBP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 ANAPC4Q9UJX5 808 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 AGTPBP1Q9UPW5 1226 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
TRAV12-3-201ENST00000390442 LAMA4Q16363 1823 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms