RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 RAVER2Q9HCJ3 691 aaKnown RBP16.85■□□□□ 0.29
SHOX-202ENST00000381575 TACC3Q9Y6A5 838 aa16.85■□□□□ 0.29
SHOX-202ENST00000381575 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 TTLL1O95922 423 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 BMP8BP34820 402 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 PDE1AP54750 535 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 RTP1P59025 263 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 TFAP4Q01664 338 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 PDE4BQ07343 736 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 ZNF792Q3KQV3 632 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 TINF2Q9BSI4 451 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 UBE2OQ9C0C9 1292 aaKnown RBP16.84■□□□□ 0.29
SHOX-202ENST00000381575 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
SHOX-202ENST00000381575 NMT2O60551 498 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 LRRC41Q15345 812 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 SLFN13Q68D06 897 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 PRPF38AQ8NAV1 312 aaKnown RBP16.83■□□□□ 0.28
SHOX-202ENST00000381575 ARRDC4Q8NCT1 418 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 MKL1Q969V6 931 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 LNPKQ9C0E8 428 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 MTMR7Q9Y216 660 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 CTDP1Q9Y5B0 961 aaPredicted RBP16.83■□□□□ 0.28
SHOX-202ENST00000381575 A0A0C4DFX4 3053 aa16.83■□□□□ 0.28
SHOX-202ENST00000381575 A0A0D9SFI3 127 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 ZBED4O75132 1171 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 PGK1P00558 417 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 SLC3A2P08195 630 aaKnown RBP16.82■□□□□ 0.28
SHOX-202ENST00000381575 ADCYAP1R1P41586 468 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 TDHQ8IZJ6 230 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 FAM227BQ96M60 508 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
SHOX-202ENST00000381575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
SHOX-202ENST00000381575 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 HDAC1Q13547 482 aaPredicted RBP16.81■□□□□ 0.28
SHOX-202ENST00000381575 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 GMCL1P1Q8NEA9 526 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 XPNPEP3Q9NQH7 507 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
SHOX-202ENST00000381575 LCTP09848 1927 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 TSPY2A6NKD2 308 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 ZNF865P0CJ78 1059 aaPredicted RBP16.8■□□□□ 0.28
SHOX-202ENST00000381575 RARBP10826 455 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 BMP3P12645 472 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 MCCP23508 829 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 COPB2P35606 906 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 SNAP25P60880 206 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
SHOX-202ENST00000381575 TRIM60Q495X7 471 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 SLC39A5Q6ZMH5 540 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 PRDM5Q9NQX1 630 aaPredicted RBP16.8■□□□□ 0.28
SHOX-202ENST00000381575 IL17RBQ9NRM6 502 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
SHOX-202ENST00000381575 RANBP6O60518 1105 aaKnown RBP16.79■□□□□ 0.28
SHOX-202ENST00000381575 KCTD1Q719H9 257 aa16.79■□□□□ 0.28
SHOX-202ENST00000381575 Q7L0L9 218 aa16.79■□□□□ 0.28
SHOX-202ENST00000381575 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
SHOX-202ENST00000381575 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
SHOX-202ENST00000381575 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
SHOX-202ENST00000381575 DIS3Q9Y2L1 958 aaKnown RBP16.79■□□□□ 0.28
SHOX-202ENST00000381575 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 ATP2A1O14983 1001 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 SNAI1O95863 264 aaPredicted RBP16.78■□□□□ 0.28
SHOX-202ENST00000381575 IRX5P78411 483 aaPredicted RBP16.78■□□□□ 0.28
SHOX-202ENST00000381575 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
SHOX-202ENST00000381575 RRP12Q5JTH9 1297 aaKnown RBP16.78■□□□□ 0.28
SHOX-202ENST00000381575 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 FGD4Q96M96 766 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 LBHD1Q9BQE6 289 aaPredicted RBP16.78■□□□□ 0.28
SHOX-202ENST00000381575 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 LRRC37A2A6NM11 1700 aa16.78■□□□□ 0.28
SHOX-202ENST00000381575 SLC1A4P43007 532 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 STAT2P52630 851 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 HAND2P61296 217 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 CCDC174Q6PII3 467 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 RILPL2Q969X0 211 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
SHOX-202ENST00000381575 DDX49Q9Y6V7 483 aaKnown RBP16.77■□□□□ 0.28
SHOX-202ENST00000381575 SYNRGQ9UMZ2 1314 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 LAMA4Q16363 1823 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 ADCY6O43306 1168 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 IGHDP01880 384 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 FGAP02671 866 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 AKR1A1P14550 325 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 CNTN2Q02246 1040 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 GMCL1Q96IK5 515 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 ANAPC4Q9UJX5 808 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms