RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TTC16Q8NEE8 873 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ZNF653Q96CK0 615 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SEPT10Q9P0V9 454 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 GMNNO75496 209 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 CABLES1Q8TDN4 633 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ZNF483Q8TF39 744 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ATP6V0A4Q9HBG4 840 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 KLHL14Q9P2G3 628 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 DKK3Q9UBP4 350 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 TULP4Q9NRJ4 1543 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SCP2P22307 547 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 PLCD1P51178 756 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 STK3Q13188 491 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 LGSNQ5TDP6 509 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 C8orf74Q6P047 294 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 STOML1Q9UBI4 398 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 CHD4Q14839 1912 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 LCA5Q86VQ0 697 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 NRBF2Q96F24 287 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 BICD1Q96G01 975 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 A0A1W2PP64 1363 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 TMEM131LA2VDJ0 1609 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 RASSF10A6NK89 507 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 KRT2P35908 639 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 MFN1Q8IWA4 741 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SRRM1Q8IYB3 904 aaKnown RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ST13P4Q8IZP2 240 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 KAT14Q9H8E8 782 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SLC5A4Q9NY91 659 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 NSFL1CQ9UNZ2 370 aaKnown RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 TOPAZ1Q8N9V7 1692 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 CYTH3O43739 400 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 PNMA6AP0CW24 399 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 HSPA9P38646 679 aaKnown RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 KPNB1Q14974 876 aaKnown RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 NEK11Q8NG66 645 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 HELLSQ9NRZ9 838 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 ORC3Q9UBD5 711 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 PPP1R9AQ9ULJ8 1098 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 COL3A1P02461 1466 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 IPO5O00410 1097 aaKnown RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 PICALMQ13492 652 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 EP400NLQ6ZTU2 488 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC197Q8NCU1 140 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 EDEM3Q9BZQ6 932 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 PRKAG2Q9UGJ0 569 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 GSTTP1A0A1W2PQM5 241 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 GJB2P29033 226 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 ACADVLP49748 655 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 TMEM57Q8N5G2 664 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CNNM3Q8NE01 707 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 C10orf88Q9H8K7 445 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 EPS15L1Q9UBC2 864 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 PHRF1Q9P1Y6 1649 aaKnown RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC188H7C350 402 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CCND1P24385 295 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CORO7P57737 925 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 DZIP3Q86Y13 1208 aaKnown RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 TMCC1O94876 653 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 SNX16P57768 344 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 NDUFA5Q16718 116 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 ANO1Q5XXA6 986 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 UBE3BQ7Z3V4 1068 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 SRLQ86TD4 932 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 LRRC8AQ8IWT6 810 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 TRAPPC9Q96Q05 1148 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 YIPF3Q9GZM5 350 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 SLC12A7Q9Y666 1083 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 SAR1BQ9Y6B6 198 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 RICTORQ6R327 1708 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 TSPY2A6NKD2 308 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 PCK1P35558 622 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC82Q8N4S0 544 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 IL17RAQ96F46 866 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 C3P01024 1663 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 NFAT5O94916 1531 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 STXBP3O00186 592 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 KCNA6P17658 529 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 CALCOCO2Q13137 446 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 NBPF15Q8N660 670 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 AGLP35573 1532 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 RIMBP2O15034 1052 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 N4BP1O75113 896 aaKnown RBP5.37□□□□□ -1.55
PTPRD-203ENST00000381196 HOXC8P31273 242 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 TRIM11Q96F44 468 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 C8orf4Q9NR00 106 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 STAP2Q9UGK3 403 aa5.37□□□□□ -1.55
PTPRD-203ENST00000381196 ABCB11O95342 1321 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 XPO1O14980 1071 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SPTLC2O15270 562 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 GFPT2O94808 682 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 UFL1O94874 794 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CDC37Q16543 378 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ADALQ6DHV7 355 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 KIFAP3Q92845 792 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 L2HGDHQ9H9P8 463 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 PARVBQ9HBI1 364 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SPC25Q9HBM1 224 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 HYOU1Q9Y4L1 999 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms