RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 COPB1P53618 953 aaKnown RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 TRAPPC11Q7Z392 1133 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 MIGA1Q8NAN2 632 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 CCDC34Q96HJ3 373 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 RMND1Q9NWS8 449 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 V9GY48 417 aaPredicted RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 PLIN4Q96Q06 1357 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 LCA5LO95447 670 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 SLC20A2Q08357 652 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 CUEDC2Q9H467 287 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 GNL3LQ9NVN8 582 aaKnown RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 CAPN11Q9UMQ6 739 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 FAM205AQ6ZU69 1335 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 A0A1W2PQJ5 194 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 EEF1GP26641 437 aaKnown RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 CASP14P31944 242 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 PPP4CP60510 307 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 DYNLL1P63167 89 aaKnown RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 PTPN21Q16825 1174 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 RC3H1Q5TC82 1133 aaKnown RBP10.07□□□□□ -0.8
OPTN-202ENST00000378747 WDR59Q6PJI9 974 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 MAD2L2Q9UI95 211 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 PCDHA4Q9UN74 947 aa10.07□□□□□ -0.8
OPTN-202ENST00000378747 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 AARSP49588 968 aaKnown RBP eCLIP10.06□□□□□ -0.8
OPTN-202ENST00000378747 MECOMQ03112 1051 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 TTI2Q6NXR4 508 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 CYP26C1Q6V0L0 522 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 NOC3LQ8WTT2 800 aaKnown RBP10.06□□□□□ -0.8
OPTN-202ENST00000378747 ABCB11O95342 1321 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 PRDM1O75626 825 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 RPN1P04843 607 aaKnown RBP10.06□□□□□ -0.8
OPTN-202ENST00000378747 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 VIPAS39Q9H9C1 493 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 DISC1Q9NRI5 854 aa10.06□□□□□ -0.8
OPTN-202ENST00000378747 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 WTIPA6NIX2 430 aaPredicted RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 VEGFAP15692 232 aaPredicted RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 CALML3P27482 149 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 GYG1P46976 350 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 EVX2Q03828 476 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 PAK1Q13153 545 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 ERFEQ4G0M1 354 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 IQCA1Q86XH1 822 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 RUBCNQ92622 972 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 EXOC4Q96A65 974 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 DESI2Q9BSY9 194 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 NRXN2Q9P2S2 1712 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 SEC31AO94979 1220 aaKnown RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 SRGNP10124 158 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 LONRF2Q1L5Z9 754 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 PNKPQ96T60 521 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 BRMS1Q9HCU9 246 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 UBR3Q6ZT12 1888 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 TARSL2A2RTX5 802 aaKnown RBP10.05□□□□□ -0.8
OPTN-202ENST00000378747 KCNJ18B7U540 433 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 ABL1P00519 1130 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 PRCPP42785 496 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 ITIH3Q06033 890 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 KCNJ12Q14500 433 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 ANKRD18AQ8IVF6 992 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 MB21D1Q8N884 522 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 C7orf25Q9BPX7 421 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 CTNND2Q9UQB3 1225 aa10.05□□□□□ -0.8
OPTN-202ENST00000378747 NIP7Q9Y221 180 aaKnown RBP eCLIP10.05□□□□□ -0.8
OPTN-202ENST00000378747 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 H3BQF6 201 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 STXBP3O00186 592 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 CASP1P29466 404 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 HERVK_113P62684 666 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 ARHGAP27Q6ZUM4 889 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 BLIDQ8IZY5 108 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
OPTN-202ENST00000378747 IQCDQ96DY2 449 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 AK8Q96MA6 479 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 ARFGAP3Q9NP61 516 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 CDK11BP21127 795 aaKnown RBP10.04□□□□□ -0.8
OPTN-202ENST00000378747 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 EHHADHQ08426 723 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
OPTN-202ENST00000378747 ZNF174Q15697 407 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 PPFIBP1Q86W92 1011 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 LINC00116Q8NCU8 138 aa10.04□□□□□ -0.8
OPTN-202ENST00000378747 NELFBQ8WX92 580 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms