RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TYW1BQ6NUM6 668 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 DPH6Q7L8W6 267 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 TRIML1Q8N9V2 468 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 CPDO75976 1380 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 RFX5P48382 616 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-203ENST00000378169 TERF1P54274 439 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 GRM1Q13255 1194 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 GPBP1Q86WP2 473 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 BCS1LQ9Y276 419 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 GOLGA6L10A0A0M3HER8 536 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 MMP10P09238 476 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 CASP1P29466 404 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 ARID5BQ14865 1188 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 TBCKQ8TEA7 893 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 SH3RF3Q8TEJ3 882 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-203ENST00000378169 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 ERCC6LQ2NKX8 1250 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 OR8K1Q8NGG5 319 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 CCDC94Q9BW85 323 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 SAMSN1Q9NSI8 373 aaKnown RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 ETF1P62495 437 aaKnown RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 ENAHQ8N8S7 591 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 SUPT20HQ8NEM7 779 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 CSRNP1Q96S65 589 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 IMPG2Q9BZV3 1241 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 DDX25Q9UHL0 483 aaKnown RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 PCDHA4Q9UN74 947 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 EXOC3O60645 756 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 BIRC3Q13489 604 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 CCDC84Q86UT8 332 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 FBXO11Q86XK2 927 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 OXER1Q8TDS5 423 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 STAG1Q8WVM7 1258 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 FAM84BQ96KN1 310 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-203ENST00000378169 SYNCQ9H7C4 482 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
NPHP4-203ENST00000378169 GAS7O60861 476 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 SLFN14P0C7P3 912 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 LONP1P36776 959 aaKnown RBP14.68□□□□□ -0.06
NPHP4-203ENST00000378169 ABCB5Q2M3G0 1257 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 GSDMAQ96QA5 445 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 GOLPH3LQ9H4A5 285 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 LY9Q9HBG7 655 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-203ENST00000378169 PRPF3O43395 683 aaKnown RBP14.68□□□□□ -0.06
NPHP4-203ENST00000378169 HSF2BPO75031 334 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 ALAS1P13196 640 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 UBXN2AP68543 259 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 CNKSR1Q969H4 720 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 NT5C3AQ9H0P0 336 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 RAD17O75943 681 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 CDK8P49336 464 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 FLAD1Q8NFF5 587 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 KIAA1524Q8TCG1 905 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 EEF2P13639 858 aaKnown RBP14.68□□□□□ -0.06
NPHP4-203ENST00000378169 CLEC17AQ6ZS10 378 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 MYOCDQ8IZQ8 938 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 MARCH10Q8NA82 808 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-203ENST00000378169 NUP58Q9BVL2 599 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 MAN1B1Q9UKM7 699 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 PPP2R2CQ9Y2T4 447 aa14.68□□□□□ -0.06
NPHP4-203ENST00000378169 TSGA10IPQ3SY00 556 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 CHURC1Q8WUH1 139 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 TIGD1Q96MW7 591 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 BRIP1Q9BX63 1249 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 MAP2P11137 1827 aaKnown RBP14.67□□□□□ -0.06
NPHP4-203ENST00000378169 FAM196BA6NMK8 535 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 TTLL1O95922 423 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 CASP14P31944 242 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-203ENST00000378169 KLHL30Q0D2K2 578 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 GALNT17Q6IS24 598 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 GDAP1L1Q96MZ0 367 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 MPHOSPH6Q99547 160 aaKnown RBP14.67□□□□□ -0.06
NPHP4-203ENST00000378169 PLEKHA4Q9H4M7 779 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 VPS18Q9P253 973 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 COL3A1P02461 1466 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-203ENST00000378169 H7C1D1 291 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 NF2P35240 595 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 TRAPPC10P48553 1259 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 HOOK3Q86VS8 718 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 LMBR1Q8WVP7 490 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 SECISBP2LQ93073 1101 aaKnown RBP14.67□□□□□ -0.06
NPHP4-203ENST00000378169 PLVAPQ9BX97 442 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 KIAA1024Q9UPX6 916 aa14.67□□□□□ -0.06
NPHP4-203ENST00000378169 SRPRBQ9Y5M8 271 aaKnown RBP14.67□□□□□ -0.06
NPHP4-203ENST00000378169 TMEM131LA2VDJ0 1609 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 GBP2P32456 591 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-203ENST00000378169 VAV2P52735 878 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 ANKRD13CQ8N6S4 541 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 PKNOX2Q96KN3 472 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 ZNF408Q9H9D4 720 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 CD209Q9NNX6 404 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 GINS2Q9Y248 185 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 EXOSC10Q01780 885 aaKnown RBP14.66□□□□□ -0.06
NPHP4-203ENST00000378169 LRRC41Q15345 812 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 PTPROQ16827 1216 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 FAM26FQ5R3K3 315 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms