RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NAF1Q96HR8 494 aaKnown RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 PHAXQ9H814 394 aaKnown RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 PFKFB2O60825 505 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 EPHB4P54760 987 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 HSP90AA5PQ58FG0 334 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 Q6ZUG5 572 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 TAF4BQ92750 862 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 ZSCAN9O15535 394 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 HOXB7P09629 217 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 ZNF131P52739 623 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 MSANTD4Q8NCY6 345 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 CEP70Q8NHQ1 597 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 UBXN6Q9BZV1 441 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 CARD9Q9H257 536 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 PRELID1Q9Y255 219 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 UGGT1Q9NYU2 1555 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 GSTA2P09210 222 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 TMCO1Q9UM00 188 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 R3HDM2Q9Y2K5 976 aaKnown RBP12.97□□□□□ -0.33
NPHP4-202ENST00000378161 LAMC1P11047 1609 aa12.97□□□□□ -0.33
NPHP4-202ENST00000378161 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-202ENST00000378161 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 AIDAQ96BJ3 306 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 PNKPQ96T60 521 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 PCYT1AP49585 367 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 GUCY1A3Q02108 690 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 NME8Q8N427 588 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
NPHP4-202ENST00000378161 ANKRD27Q96NW4 1050 aa12.96□□□□□ -0.33
NPHP4-202ENST00000378161 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.33
NPHP4-202ENST00000378161 FAM107AO95990 144 aa12.96□□□□□ -0.34
NPHP4-202ENST00000378161 ALOX15P16050 662 aaPredicted RBP12.96□□□□□ -0.34
NPHP4-202ENST00000378161 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.34
NPHP4-202ENST00000378161 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.34
NPHP4-202ENST00000378161 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.34
NPHP4-202ENST00000378161 PCDHGC5Q9Y5F6 944 aa12.96□□□□□ -0.34
NPHP4-202ENST00000378161 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.34
NPHP4-202ENST00000378161 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-202ENST00000378161 NLRP12P59046 1061 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 GFM2Q969S9 779 aaKnown RBP12.95□□□□□ -0.34
NPHP4-202ENST00000378161 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
NPHP4-202ENST00000378161 PALD1Q9ULE6 856 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-202ENST00000378161 RTN2O75298 545 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 IDEP14735 1019 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 KRT83P78385 493 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 METTL24Q5JXM2 366 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 ATL3Q6DD88 541 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 OLFM3Q96PB7 478 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 LRRC2Q9BYS8 371 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 SBNO1A3KN83 1393 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 SCTRP47872 440 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 RAD23BP54727 409 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 LRRC45Q96CN5 670 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 KCND1Q9NSA2 647 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 CYP11B2P19099 503 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 CRELD2Q6UXH1 353 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-202ENST00000378161 IQCF2Q8IXL9 164 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 SSH3Q8TE77 659 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 PPP1R9AQ9ULJ8 1098 aa12.95□□□□□ -0.34
NPHP4-202ENST00000378161 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 CCDC102BQ68D86 513 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 ZC3H18Q86VM9 953 aaKnown RBP12.94□□□□□ -0.34
NPHP4-202ENST00000378161 ST13P4Q8IZP2 240 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-202ENST00000378161 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 SHROOM2Q13796 1616 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 PTCH1Q13635 1447 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 A0A1B0GVL5 298 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-202ENST00000378161 VPS41P49754 854 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 USP14P54578 494 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
NPHP4-202ENST00000378161 PDIA5Q14554 519 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 TMTC1Q8IUR5 882 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms