RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 EVI5LQ96CN4 794 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 LRCH3Q96II8 777 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 FEM1BQ9UK73 627 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 PLIN4Q96Q06 1357 aa25.01■■□□□ 1.59
VSX1-201ENST00000376707 TDHQ8IZJ6 230 aa25■■□□□ 1.59
VSX1-201ENST00000376707 DDX11Q96FC9 970 aa25■■□□□ 1.59
VSX1-201ENST00000376707 ISY1Q9ULR0 285 aaKnown RBP25■■□□□ 1.59
VSX1-201ENST00000376707 ATP2A1O14983 1001 aa24.99■■□□□ 1.59
VSX1-201ENST00000376707 RTP1P59025 263 aa24.99■■□□□ 1.59
VSX1-201ENST00000376707 SLFN13Q68D06 897 aa24.99■■□□□ 1.59
VSX1-201ENST00000376707 PRKAG2Q9UGJ0 569 aa24.99■■□□□ 1.59
VSX1-201ENST00000376707 SZT2Q5T011 3432 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 RARBP10826 455 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 BMP3P12645 472 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 PDE1AP54750 535 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 MDM2Q00987 491 aaPredicted RBP24.98■■□□□ 1.59
VSX1-201ENST00000376707 LRRC41Q15345 812 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 PPP4R3BQ5MIZ7 849 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 SLC38A10Q9HBR0 1119 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 RAVER2Q9HCJ3 691 aaKnown RBP24.98■■□□□ 1.59
VSX1-201ENST00000376707 XPNPEP3Q9NQH7 507 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 CNPY2Q9Y2B0 182 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 ATP11BQ9Y2G3 1177 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 RIPK3Q9Y572 518 aa24.98■■□□□ 1.59
VSX1-201ENST00000376707 LBHD1Q9BQE6 289 aaPredicted RBP24.97■■□□□ 1.59
VSX1-201ENST00000376707 TSPY2A6NKD2 308 aa24.96■■□□□ 1.59
VSX1-201ENST00000376707 FOXP2O15409 715 aa24.96■■□□□ 1.59
VSX1-201ENST00000376707 TAL1P17542 331 aaPredicted RBP24.96■■□□□ 1.59
VSX1-201ENST00000376707 ADCYAP1R1P41586 468 aa24.96■■□□□ 1.59
VSX1-201ENST00000376707 CTDSPL2Q05D32 466 aa24.96■■□□□ 1.59
VSX1-201ENST00000376707 SLC39A5Q6ZMH5 540 aa24.96■■□□□ 1.59
VSX1-201ENST00000376707 MSL3Q8N5Y2 521 aaKnown RBP24.96■■□□□ 1.59
VSX1-201ENST00000376707 HELLSQ9NRZ9 838 aa24.96■■□□□ 1.59
VSX1-201ENST00000376707 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.96■■□□□ 1.59
VSX1-201ENST00000376707 MYH4Q9Y623 1939 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 TMEM232C9JQI7 657 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 AKR1A1P14550 325 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 OAZ1P54368 228 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 IKQ13123 557 aaPredicted RBP24.95■■□□□ 1.58
VSX1-201ENST00000376707 LRIT3Q3SXY7 679 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 VPS53Q5VIR6 699 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 FERMT2Q96AC1 680 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 FBXO40Q9UH90 709 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 STX8Q9UNK0 236 aa24.95■■□□□ 1.58
VSX1-201ENST00000376707 ZNF865P0CJ78 1059 aaPredicted RBP24.94■■□□□ 1.58
VSX1-201ENST00000376707 FDX1P10109 184 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 SLC1A4P43007 532 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 STAT2P52630 851 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 RNF180Q86T96 592 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 SMC5Q8IY18 1101 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 ANKRD35Q8N283 1001 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 GMCL1Q96IK5 515 aa24.94■■□□□ 1.58
VSX1-201ENST00000376707 ZNFX1Q9P2E3 1918 aaKnown RBP24.94■■□□□ 1.58
VSX1-201ENST00000376707 SYNGAP1Q96PV0 1343 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 DNAJC25-GNG10A0A024R161 153 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 PGK1P00558 417 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 FAM160B2Q86V87 743 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 CHST13Q8NET6 341 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 CHURC1Q8WUH1 139 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 CHMP4CQ96CF2 233 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 LNPKQ9C0E8 428 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 RWDD1Q9H446 243 aaPredicted RBP24.93■■□□□ 1.58
VSX1-201ENST00000376707 INCENPQ9NQS7 918 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 ANAPC4Q9UJX5 808 aa24.93■■□□□ 1.58
VSX1-201ENST00000376707 RANBP6O60518 1105 aaKnown RBP24.92■■□□□ 1.58
VSX1-201ENST00000376707 MCCP23508 829 aa24.92■■□□□ 1.58
VSX1-201ENST00000376707 TRIM60Q495X7 471 aa24.92■■□□□ 1.58
VSX1-201ENST00000376707 TICAM2Q86XR7 235 aa24.92■■□□□ 1.58
VSX1-201ENST00000376707 FAM227BQ96M60 508 aa24.92■■□□□ 1.58
VSX1-201ENST00000376707 PRDM5Q9NQX1 630 aaPredicted RBP24.92■■□□□ 1.58
VSX1-201ENST00000376707 PHF24Q9UPV7 400 aa24.92■■□□□ 1.58
VSX1-201ENST00000376707 PLXNA1Q9UIW2 1896 aa24.92■■□□□ 1.58
VSX1-201ENST00000376707 LAMA3Q16787 3333 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 SNX17Q15036 470 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 ALX1Q15699 326 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 MCMDC2Q4G0Z9 681 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 GPR153Q6NV75 609 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 MAMDC4Q6UXC1 1216 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.91■■□□□ 1.58
VSX1-201ENST00000376707 ZNF467Q7Z7K2 595 aaPredicted RBP24.91■■□□□ 1.58
VSX1-201ENST00000376707 STAG1Q8WVM7 1258 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 IL17RBQ9NRM6 502 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 HOMER2Q9NSB8 354 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 ZHX1Q9UKY1 873 aaPredicted RBP24.91■■□□□ 1.58
VSX1-201ENST00000376707 FAM184BQ9ULE4 1060 aa24.91■■□□□ 1.58
VSX1-201ENST00000376707 A0A0D9SFI3 127 aa24.9■■□□□ 1.58
VSX1-201ENST00000376707 TRIM6-TRIM34B2RNG4 842 aa24.9■■□□□ 1.58
VSX1-201ENST00000376707 NMT2O60551 498 aa24.9■■□□□ 1.58
VSX1-201ENST00000376707 SNAI1O95863 264 aaPredicted RBP24.9■■□□□ 1.58
VSX1-201ENST00000376707 LENG1Q96BZ8 264 aaPredicted RBP24.9■■□□□ 1.58
VSX1-201ENST00000376707 TOMM22Q9NS69 142 aa24.9■■□□□ 1.58
VSX1-201ENST00000376707 ORC4O43929 436 aa24.89■■□□□ 1.58
VSX1-201ENST00000376707 C1orf53Q5VUE5 145 aa24.89■■□□□ 1.58
VSX1-201ENST00000376707 KCTD1Q719H9 257 aa24.89■■□□□ 1.58
VSX1-201ENST00000376707 EXOC6Q8TAG9 804 aa24.89■■□□□ 1.58
VSX1-201ENST00000376707 ACAD9Q9H845 621 aa24.89■■□□□ 1.58
VSX1-201ENST00000376707 FGAP02671 866 aa24.88■■□□□ 1.57
VSX1-201ENST00000376707 NMIQ13287 307 aaPredicted RBP24.88■■□□□ 1.57
VSX1-201ENST00000376707 RCSD1Q6JBY9 416 aa24.88■■□□□ 1.57
VSX1-201ENST00000376707 B4GALNT3Q6L9W6 998 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms