RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 PHF20Q9BVI0 1012 aa22.18■■□□□ 1.14
NECAB3-202ENST00000375238 TMEM39BQ9GZU3 492 aa22.18■■□□□ 1.14
NECAB3-202ENST00000375238 FOXP1Q9H334 677 aaPredicted RBP22.18■■□□□ 1.14
NECAB3-202ENST00000375238 NRBP1Q9UHY1 535 aa22.18■■□□□ 1.14
NECAB3-202ENST00000375238 CNOT7Q9UIV1 285 aaKnown RBP22.18■■□□□ 1.14
NECAB3-202ENST00000375238 TMEM179Q6ZVK1 233 aa22.18■■□□□ 1.14
NECAB3-202ENST00000375238 KANSL2Q9H9L4 492 aa22.18■■□□□ 1.14
NECAB3-202ENST00000375238 CYTH3O43739 400 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 EGFRP00533 1210 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 LMNB1P20700 586 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 SEPT2Q15019 361 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 SLC35G1Q2M3R5 365 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 CEP57L1Q8IYX8 460 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 CPVLQ9H3G5 476 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 HPSEQ9Y251 543 aa22.17■■□□□ 1.14
NECAB3-202ENST00000375238 FAM237AA0A1B0GTK4 181 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 SHC4Q6S5L8 630 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 SAMD7Q7Z3H4 446 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 OXER1Q8TDS5 423 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 SYT17Q9BSW7 474 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 SPZ1Q9BXG8 430 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.16■■□□□ 1.14
NECAB3-202ENST00000375238 FRMPD2Q68DX3 1309 aaPredicted RBP22.16■■□□□ 1.14
NECAB3-202ENST00000375238 SBF1O95248 1867 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 EEF2P13639 858 aaKnown RBP22.16■■□□□ 1.14
NECAB3-202ENST00000375238 KRT2P35908 639 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 TNNI2P48788 182 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 NR5A1Q13285 461 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 TBC1D10BQ4KMP7 808 aaPredicted RBP22.16■■□□□ 1.14
NECAB3-202ENST00000375238 ASPRV1Q53RT3 343 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 DRC7Q8IY82 874 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 TIGD1Q96MW7 591 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 BRMS1Q9HCU9 246 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 CABP5Q9NP86 173 aa22.16■■□□□ 1.14
NECAB3-202ENST00000375238 VEGFAP15692 232 aaPredicted RBP22.15■■□□□ 1.14
NECAB3-202ENST00000375238 ICA1Q05084 483 aa22.15■■□□□ 1.14
NECAB3-202ENST00000375238 CDAN1Q8IWY9 1227 aa22.15■■□□□ 1.14
NECAB3-202ENST00000375238 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
NECAB3-202ENST00000375238 GPKOWQ92917 476 aaPredicted RBP eCLIP22.15■■□□□ 1.144e-6■□□□□ 10.4
NECAB3-202ENST00000375238 MRFAP1L1Q96HT8 127 aa22.15■■□□□ 1.14
NECAB3-202ENST00000375238 NYAP2Q9P242 653 aa22.15■■□□□ 1.14
NECAB3-202ENST00000375238 BECN2A8MW95 431 aa22.14■■□□□ 1.14
NECAB3-202ENST00000375238 GH2P01242 217 aa22.14■■□□□ 1.14
NECAB3-202ENST00000375238 SNHG28P0DPA3 235 aa22.14■■□□□ 1.14
NECAB3-202ENST00000375238 RRP1BQ14684 758 aaKnown RBP22.14■■□□□ 1.14
NECAB3-202ENST00000375238 NAT10Q9H0A0 1025 aaKnown RBP22.14■■□□□ 1.14
NECAB3-202ENST00000375238 SMARCA1P28370 1054 aa22.14■■□□□ 1.13
NECAB3-202ENST00000375238 NLRP5P59047 1200 aa22.14■■□□□ 1.13
NECAB3-202ENST00000375238 DPCR1Q3MIW9 517 aa22.14■■□□□ 1.13
NECAB3-202ENST00000375238 UBA5Q9GZZ9 404 aa22.14■■□□□ 1.13
NECAB3-202ENST00000375238 GPCPD1Q9NPB8 672 aa22.14■■□□□ 1.13
NECAB3-202ENST00000375238 SCAF8Q9UPN6 1271 aaKnown RBP22.14■■□□□ 1.13
NECAB3-202ENST00000375238 RAD21O60216 631 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 TOB1P50616 345 aaPredicted RBP22.13■■□□□ 1.13
NECAB3-202ENST00000375238 JAG1P78504 1218 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 TNFAIP1Q13829 316 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 KIF4BQ2VIQ3 1234 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 CCDC144BQ3MJ40 725 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 RESP18Q5W5W9 173 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 AOPEPQ8N6M6 819 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 RRP36Q96EU6 259 aaKnown RBP22.13■■□□□ 1.13
NECAB3-202ENST00000375238 BPIFA3Q9BQP9 254 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 VAT1LQ9HCJ6 419 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 SH3GLB2Q9NR46 395 aa22.13■■□□□ 1.13
NECAB3-202ENST00000375238 SYKP43405 635 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 ZNF543Q08ER8 600 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 LRMPQ12912 555 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 RASA3Q14644 834 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 CCDC96Q2M329 555 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 MIGA2Q7L4E1 593 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 HEATR3Q7Z4Q2 680 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 HOMER1Q86YM7 354 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 MKL1Q969V6 931 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 CLIC6Q96NY7 704 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 UQCRHLA0A096LP55 91 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 H7C1D1 291 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 CUTAO60888 179 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 UQCRHP07919 91 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 NLRP12P59046 1061 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 WWC2Q6AWC2 1192 aa22.12■■□□□ 1.13
NECAB3-202ENST00000375238 SEC63Q9UGP8 760 aaKnown RBP22.12■■□□□ 1.13
NECAB3-202ENST00000375238 ASTN2O75129 1339 aaPredicted RBP22.11■■□□□ 1.13
NECAB3-202ENST00000375238 TBC1D12O60347 775 aa22.11■■□□□ 1.13
NECAB3-202ENST00000375238 NPY5RQ15761 445 aa22.11■■□□□ 1.13
NECAB3-202ENST00000375238 RILPL1Q5EBL4 403 aa22.11■■□□□ 1.13
NECAB3-202ENST00000375238 DNTTIP2Q5QJE6 756 aaKnown RBP22.11■■□□□ 1.13
NECAB3-202ENST00000375238 SIAH1Q8IUQ4 282 aa22.11■■□□□ 1.13
NECAB3-202ENST00000375238 PGAP2Q9UHJ9 254 aa22.11■■□□□ 1.13
NECAB3-202ENST00000375238 CALML3P27482 149 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 GPATCH4Q5T3I0 446 aaKnown RBP22.1■■□□□ 1.13
NECAB3-202ENST00000375238 GPC2Q8N158 579 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 CACTINQ8WUQ7 758 aaKnown RBP22.1■■□□□ 1.13
NECAB3-202ENST00000375238 PIGSQ96S52 555 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 RIOX1Q9H6W3 641 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 HACL1Q9UJ83 578 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 SLFN13Q68D06 897 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 CCDC148Q8NFR7 591 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 BARHL2Q9NY43 387 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 TUBE1Q9UJT0 475 aa22.1■■□□□ 1.13
NECAB3-202ENST00000375238 BIN1O00499 593 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms