RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NAPBQ9H115 298 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ZMYM6O95789 1325 aa12.87□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ADORA2AP29274 412 aa12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GIMAP6Q6P9H5 292 aa12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MOV10L1Q9BXT6 1211 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PRKAG2Q9UGJ0 569 aa12.86□□□□□ -0.35
HLA-DQA1-202ENST00000374949 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 DNAH12Q6ZR08 3092 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 A0A1W2PRG0 241 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 E7EWF7 191 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MPHOSPH10O00566 681 aaKnown RBP12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 IGHA2P01877 340 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TDO2P48775 406 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ATP8A2Q9NTI2 1148 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CYP2D6P10635 497 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 CPA1P15085 419 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ERCC3P19447 782 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 HAND2P61296 217 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 GABPAQ06546 454 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TRIM60Q495X7 471 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 C9orf50Q5SZB4 431 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 ZNF697Q5TEC3 545 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 TTC14Q96N46 770 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 SPATC1LQ9H0A9 340 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 MCM9Q9NXL9 1143 aa12.84□□□□□ -0.35
HLA-DQA1-202ENST00000374949 LAMA2P24043 3122 aaKnown RBP12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 PLXNA1Q9UIW2 1896 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 KBTBD13C9JR72 458 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 COBLO75128 1261 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 PLS1Q14651 629 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 COG2Q14746 738 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SHHQ15465 462 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 DHX32Q7L7V1 743 aaKnown RBP12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SDR42E1Q8WUS8 393 aa12.83□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ZNFX1Q9P2E3 1918 aaKnown RBP12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SEPT4O43236 478 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 TRDNQ13061 729 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 PRAMEF19Q5SWL8 479 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SLC39A5Q6ZMH5 540 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SPICE1Q8N0Z3 855 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ARRDC4Q8NCT1 418 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 NCOA7Q8NI08 942 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 BADQ92934 168 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ATG4CQ96DT6 458 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 DCP1AQ9NPI6 582 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 PDLIM7Q9NR12 457 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ANAPC4Q9UJX5 808 aa12.82□□□□□ -0.36
HLA-DQA1-202ENST00000374949 CDH23Q9H251 3354 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 STRNO43815 780 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 FLOT1O75955 427 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 AKR1B1P15121 316 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ADCYAP1R1P41586 468 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 AK2P54819 239 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 EXOSC10Q01780 885 aaKnown RBP12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 PPARAQ07869 468 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SNX17Q15036 470 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 LRRC41Q15345 812 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 MFSD6Q6ZSS7 791 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 TMEM179Q6ZVK1 233 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 SH3RF1Q7Z6J0 888 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 DYNLL2Q96FJ2 89 aa12.81□□□□□ -0.36
HLA-DQA1-202ENST00000374949 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms