RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 UTP11Q9Y3A2 253 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 PPP2R5EQ16537 467 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 LRRC8AQ8IWT6 810 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 KIAA1524Q8TCG1 905 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 BRIP1Q9BX63 1249 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 AZI2Q9H6S1 392 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 PKD2L1Q9P0L9 805 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 DDX25Q9UHL0 483 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 TRPC3Q13507 836 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 XRCC5P13010 732 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 RESTQ13127 1097 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 ERFEQ4G0M1 354 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 MIER3Q7Z3K6 550 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 IFIH1Q9BYX4 1025 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 PUS7LQ9H0K6 701 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 IGSF3O75054 1194 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 TECP42680 631 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 SLC8A3P57103 927 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 PAK2Q13177 524 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 SLFN13Q68D06 897 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 DHTKD1Q96HY7 919 aaPredicted RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 RABGAP1Q9Y3P9 1069 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 TTLL1O95922 423 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 GJC1P36383 396 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 CCDC14Q49A88 953 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 DHX36Q9H2U1 1008 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 IQGAP1P46940 1657 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 TRIM37O94972 964 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 FERP16591 822 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 EEF1GP26641 437 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 BRD3Q15059 726 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 RPS6KA1Q15418 735 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 PLCD4Q9BRC7 762 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 AMNQ9BXJ7 453 aa11.61□□□□□ -0.55
NUP188-201ENST00000372577 MAK16Q9BXY0 300 aaKnown RBP11.61□□□□□ -0.55
NUP188-201ENST00000372577 SP4Q02446 784 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 SEC31BQ9NQW1 1179 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 SERPINB2P05120 415 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 GRAPQ13588 217 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 MTMR3Q13615 1198 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 RUFY4Q6ZNE9 571 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 CMTR1Q8N1G2 835 aaKnown RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 SH3GLB2Q9NR46 395 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 STK17AQ9UEE5 414 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 GABPB1Q06547 395 aaPredicted RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 NSMFQ6X4W1 530 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 NELFCDQ8IXH7 590 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 LCORLQ8N3X6 602 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 TEKT3Q9BXF9 490 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 OVOS2A0A0G2JMS6 1433 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 OVOS2A0A0J9YW53 1432 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 CRB1P82279 1406 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 OVOS2Q6IE36 1432 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 TRIM28Q13263 835 aaKnown RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 ABCB5Q2M3G0 1257 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 STAMQ92783 540 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 FANCLQ9NW38 375 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 ARMCX3Q9UH62 379 aaPredicted RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 SAR1BQ9Y6B6 198 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 ETF1P62495 437 aaKnown RBP11.6□□□□□ -0.55
NUP188-201ENST00000372577 SEPT2Q15019 361 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 AFAP1L1Q8TED9 768 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 CCDC114Q96M63 670 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 CLIC6Q96NY7 704 aa11.6□□□□□ -0.55
NUP188-201ENST00000372577 STAT1P42224 750 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 CCDC121Q6ZUS5 278 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.551e-7■■■□□ 16.3
NUP188-201ENST00000372577 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 PPP2R2CQ9Y2T4 447 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
NUP188-201ENST00000372577 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms