RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CRACR2BQ8N4Y2 399 aaPredicted RBP13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 ANGEL1Q9UNK9 670 aaKnown RBP13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 A0A1B0GVL5 298 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 ARHGAP6O43182 974 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 PPP6R2O75170 966 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 FGAP02671 866 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 FDPSP14324 419 aaKnown RBP13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 C1QTNF8P60827 252 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 MYSM1Q5VVJ2 828 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 SYNE3Q6ZMZ3 975 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 TRIM34Q9BYJ4 488 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
TSPAN1-201ENST00000372003 TMEM88BA6NKF7 163 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 USP2O75604 605 aaPredicted RBP13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 MYL5Q02045 173 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 GPS2Q13227 327 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 C12orf60Q5U649 245 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 ANO1Q5XXA6 986 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 DCAF15Q66K64 600 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 DYNLL2Q96FJ2 89 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 ATRNL1Q5VV63 1379 aa13.02□□□□□ -0.32
TSPAN1-201ENST00000372003 APLP1P51693 650 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 SLC39A14Q15043 492 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 AXDND1Q5T1B0 1012 aaPredicted RBP13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 REXO1L1PQ8IX06 675 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 PSD3Q9NYI0 1048 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 ARPP21Q9UBL0 812 aaPredicted RBP13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 HPSEQ9Y251 543 aa13.02□□□□□ -0.33
TSPAN1-201ENST00000372003 IREB2P48200 963 aaKnown RBP13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 UBASH3AP57075 661 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 HAND2P61296 217 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 HTRA3P83110 453 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 TUBB2AQ13885 445 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 WRNIP1Q96S55 665 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 TUBB2BQ9BVA1 445 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 ZNF341Q9BYN7 854 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 SSC5DA1L4H1 1573 aa13.01□□□□□ -0.33
TSPAN1-201ENST00000372003 PFKFB1P16118 471 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 HUNKP57058 714 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
TSPAN1-201ENST00000372003 MAP3K9P80192 1104 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 PPARAQ07869 468 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 ALX1Q15699 326 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 SBK1Q52WX2 424 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 RABGGTAQ92696 567 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
TSPAN1-201ENST00000372003 KLRG1Q96E93 195 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 DNAJC18Q9H819 358 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 HERC5Q9UII4 1024 aaKnown RBP13□□□□□ -0.33
TSPAN1-201ENST00000372003 POLR2AP24928 1970 aaKnown RBP13□□□□□ -0.33
TSPAN1-201ENST00000372003 MYH7P12883 1935 aa13□□□□□ -0.33
TSPAN1-201ENST00000372003 TBC1D12O60347 775 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 STX10O60499 249 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 TOP1P11387 765 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 CDK11BP21127 795 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 INPP5BP32019 993 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 SYKP43405 635 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 IMMTQ16891 758 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 EHD4Q9H223 541 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 HSD3B7Q9H2F3 369 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 NCOA5Q9HCD5 579 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 COL2A1P02458 1487 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 ECM29Q5VYK3 1845 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 ZNF213O14771 459 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 CDKL5O76039 1030 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 SERPINC1P01008 464 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 CASQ1P31415 396 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 FKBP1BP68106 108 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 MAP3K10Q02779 954 aa12.99□□□□□ -0.33
TSPAN1-201ENST00000372003 TBX2Q13207 712 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms