RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SLC5A4Q9NY91 659 aa15.71■□□□□ 0.11
RPF1-201ENST00000370654 LTBP2Q14767 1821 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 SNAI1O95863 264 aaPredicted RBP15.7■□□□□ 0.1
RPF1-201ENST00000370654 GNAT2P19087 354 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 MX1P20591 662 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
RPF1-201ENST00000370654 KCTD2Q14681 263 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 VPS53Q5VIR6 699 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 ZNF444Q8N0Y2 327 aaPredicted RBP15.7■□□□□ 0.1
RPF1-201ENST00000370654 NEDD1Q8NHV4 660 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 KIFC2Q96AC6 838 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 FGD4Q96M96 766 aa15.7■□□□□ 0.1
RPF1-201ENST00000370654 DNAJC25-GNG10A0A024R161 153 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 KBTBD13C9JR72 458 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 TFAP4Q01664 338 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 CTDSPL2Q05D32 466 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 PPARAQ07869 468 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 SNX17Q15036 470 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 DEFB123Q8N688 67 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
RPF1-201ENST00000370654 TEX13BQ9BXU2 312 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 XPNPEP3Q9NQH7 507 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 DIS3Q9Y2L1 958 aaKnown RBP15.69■□□□□ 0.1
RPF1-201ENST00000370654 COL6A3P12111 3177 aa15.69■□□□□ 0.1
RPF1-201ENST00000370654 TRIM43BA6NCK2 446 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 ERC2O15083 957 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 ADCY6O43306 1168 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 NMT2O60551 498 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 ITGB8P26012 769 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 SLFN13Q68D06 897 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 TRIM43Q96BQ3 446 aaPredicted RBP15.68■□□□□ 0.1
RPF1-201ENST00000370654 SLC38A10Q9HBR0 1119 aa15.68■□□□□ 0.1
RPF1-201ENST00000370654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPF1-201ENST00000370654 PLIN4Q96Q06 1357 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 MYADML2A6NDP7 307 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 TTLL1O95922 423 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 SNAP25P60880 206 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 C9orf50Q5SZB4 431 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 GMCL1P1Q8NEA9 526 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 NAPBQ9H115 298 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 PRDM5Q9NQX1 630 aaPredicted RBP15.67■□□□□ 0.1
RPF1-201ENST00000370654 PDLIM7Q9NR12 457 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 IL17RBQ9NRM6 502 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 MTMR10Q9NXD2 777 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 PHF24Q9UPV7 400 aa15.67■□□□□ 0.1
RPF1-201ENST00000370654 DDX49Q9Y6V7 483 aaKnown RBP15.67■□□□□ 0.1
RPF1-201ENST00000370654 ZBED4O75132 1171 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 ADAMTS4O75173 837 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 TSPY3P0CV98 308 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 TSPY8P0CW00 308 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 RARBP10826 455 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 TLE2Q04725 743 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 SHHQ15465 462 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 GPR153Q6NV75 609 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 BADQ92934 168 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 NACAP1Q9BZK3 213 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 NRBP1Q9UHY1 535 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 FEM1BQ9UK73 627 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 ZNF536O15090 1300 aa15.66■□□□□ 0.1
RPF1-201ENST00000370654 TMEM232C9JQI7 657 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 BMP3P12645 472 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 MCCP23508 829 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 COPB2P35606 906 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 MAMDC4Q6UXC1 1216 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 FAM227BQ96M60 508 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 AGBL1Q96MI9 1066 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 LBHD1Q9BQE6 289 aaPredicted RBP15.65■□□□□ 0.1
RPF1-201ENST00000370654 HOMER2Q9NSB8 354 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 MCM3APO60318 1980 aa15.65■□□□□ 0.1
RPF1-201ENST00000370654 A0A1W2PQ45 241 aaPredicted RBP15.64■□□□□ 0.09
RPF1-201ENST00000370654 A0A1W2PQY0 241 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 AKR1A1P14550 325 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 PTGS1P23219 599 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 PDE1AP54750 535 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 CNTN2Q02246 1040 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 PDE4BQ07343 736 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 CCSAPQ6IQ19 270 aaPredicted RBP15.64■□□□□ 0.09
RPF1-201ENST00000370654 KCTD1Q719H9 257 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 ZHX1Q9UKY1 873 aaPredicted RBP15.64■□□□□ 0.09
RPF1-201ENST00000370654 SYNRGQ9UMZ2 1314 aa15.64■□□□□ 0.09
RPF1-201ENST00000370654 A0A0D9SFI3 127 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 POTEB2H3BUK9 544 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 EPHB4P54760 987 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 LRRFIP1Q32MZ4 808 aaKnown RBP15.63■□□□□ 0.09
RPF1-201ENST00000370654 C1orf53Q5VUE5 145 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPF1-201ENST00000370654 KLHDC9Q8NEP7 349 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 KATNBL1Q9H079 304 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.63■□□□□ 0.09
RPF1-201ENST00000370654 PRKAG2Q9UGJ0 569 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 SYNPO2Q9UMS6 1093 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 SYNGAP1Q96PV0 1343 aa15.63■□□□□ 0.09
RPF1-201ENST00000370654 ACVR2BQ13705 512 aa15.62■□□□□ 0.09
RPF1-201ENST00000370654 RNF180Q86T96 592 aa15.62■□□□□ 0.09
RPF1-201ENST00000370654 ANKRD35Q8N283 1001 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms