RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 ZMYND10O75800 440 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 POLR2FP61218 127 aaKnown RBP18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 SP4Q02446 784 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 SDCCAG8Q86SQ7 713 aaPredicted RBP18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 PABPN1LA6NDY0 278 aaKnown RBP18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 CFAP57Q96MR6 1250 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 UIMC1Q96RL1 719 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 ARMCX3Q9UH62 379 aaPredicted RBP18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 USTQ9Y2C2 406 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 TECP42680 631 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 TTLL12Q14166 644 aaPredicted RBP18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 SNCBQ16143 134 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 DNAJC10Q8IXB1 793 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 SSX2IPQ9Y2D8 614 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 H2AFZP0C0S5 128 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 OR52Z1P0C646 297 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 ARID5BQ14865 1188 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 PTPROQ16827 1216 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 H2AFVQ71UI9 128 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 RAB3IPQ96QF0 476 aaPredicted RBP18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 ARPP21Q9UBL0 812 aaPredicted RBP18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 BIN2Q9UBW5 565 aaPredicted RBP18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 CLTAP09496 248 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 NECTIN1Q15223 517 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 PHLDB2Q86SQ0 1253 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 MAN1B1Q9UKM7 699 aa18.88■□□□□ 0.61
PTP4A1-201ENST00000370651 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 TBC1D8O95759 1140 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 EEF1GP26641 437 aaKnown RBP18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 EHHADHQ08426 723 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 IFT88Q13099 833 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 SOWAHDA6NJG2 315 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 I3L4J1 428 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 HARSP12081 509 aaKnown RBP18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 CLEC17AQ6ZS10 378 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 EEF2KMTQ96G04 330 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 CNOT6LQ96LI5 555 aaKnown RBP18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 VPS37BQ9H9H4 285 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 SLC39A2Q9NP94 309 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 TPD52P55327 224 aaPredicted RBP18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 ACRBPQ8NEB7 543 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 TFCP2L1Q9NZI6 479 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 B4DLN1 442 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 TROVE2P10155 538 aaKnown RBP eCLIP18.87■□□□□ 0.613e-9■□□□□ 9.6
PTP4A1-201ENST00000370651 GPBP1Q86WP2 473 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 ZNF354CQ86Y25 554 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 KRT12Q99456 494 aa18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.87■□□□□ 0.61
PTP4A1-201ENST00000370651 PTCH1Q13635 1447 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 SLC1A4P43007 532 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 CASP8Q14790 479 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 COBLO75128 1261 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 UBE3CQ15386 1083 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 LGSNQ5TDP6 509 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 DCUN1D2Q6PH85 259 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 MAEAQ7L5Y9 396 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 RASSF7Q02833 373 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 SMYD4Q8IYR2 804 aaPredicted RBP18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 VEZTQ9HBM0 779 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
PTP4A1-201ENST00000370651 ATP1A3P13637 1013 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 ITIH3Q06033 890 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 MAPKAPK5Q8IW41 473 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 RETREG2Q8NC44 543 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 TTC16Q8NEE8 873 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 SAMSN1Q9NSI8 373 aaKnown RBP18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 MAST3O60307 1309 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 CTSWP56202 376 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 MUM1Q2TAK8 710 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 UFL1O94874 794 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 SMC1BQ8NDV3 1235 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 SDR42E1Q8WUS8 393 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 P3H4Q92791 437 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 SLFN14P0C7P3 912 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 NEK8Q86SG6 692 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 PI4K2BQ8TCG2 481 aa18.85■□□□□ 0.61
PTP4A1-201ENST00000370651 HEXIM1O94992 359 aaKnown RBP18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 SLFNL1Q499Z3 407 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 GALNT17Q6IS24 598 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 GRAMD1CQ8IYS0 662 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 PNMA1Q8ND90 353 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 UHMK1Q8TAS1 419 aaKnown RBP18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 DDAH1O94760 285 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 KIFC2Q96AC6 838 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 PANX2Q96RD6 677 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 ABCB6Q9NP58 842 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 JRKLQ9Y4A0 524 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 FMNL1O95466 1100 aaPredicted RBP18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 MAGEF1Q9HAY2 307 aa18.84■□□□□ 0.61
PTP4A1-201ENST00000370651 TXNDC9O14530 226 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 PROSER3Q2NL68 480 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 TRIM68Q6AZZ1 485 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 RDH13Q8NBN7 331 aa18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 RNF26Q9BY78 433 aaPredicted RBP18.83■□□□□ 0.61
PTP4A1-201ENST00000370651 EPB41L5Q9HCM4 733 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms