RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ZYXQ15942 572 aaKnown RBP10.29□□□□□ -0.76
SNX27-201ENST00000368838 RALYLQ86SE5 291 aaKnown RBP10.29□□□□□ -0.76
SNX27-201ENST00000368838 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
SNX27-201ENST00000368838 DIS3LQ8TF46 1054 aaKnown RBP10.29□□□□□ -0.76
SNX27-201ENST00000368838 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
SNX27-201ENST00000368838 AS3MTQ9HBK9 375 aa10.29□□□□□ -0.76
SNX27-201ENST00000368838 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
SNX27-201ENST00000368838 HERC5Q9UII4 1024 aaKnown RBP10.29□□□□□ -0.76
SNX27-201ENST00000368838 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNX27-201ENST00000368838 RANBP2P49792 3224 aaKnown RBP10.28□□□□□ -0.76
SNX27-201ENST00000368838 HSP90AA1P07900 732 aaKnown RBP10.28□□□□□ -0.76
SNX27-201ENST00000368838 SLC3A2P08195 630 aaKnown RBP10.28□□□□□ -0.76
SNX27-201ENST00000368838 CYP2B6P20813 491 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 USP5P45974 858 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 IRX3P78415 501 aaPredicted RBP10.28□□□□□ -0.76
SNX27-201ENST00000368838 EVX2Q03828 476 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 ME3Q16798 604 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 CCDC178Q5BJE1 867 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 MFSD6Q6ZSS7 791 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 ANKS1AQ92625 1134 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 PAGR1Q9BTK6 254 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 DHX36Q9H2U1 1008 aaKnown RBP10.28□□□□□ -0.76
SNX27-201ENST00000368838 TXNRD2Q9NNW7 524 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 TMOD4Q9NZQ9 345 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 RBM27Q9P2N5 1060 aaKnown RBP10.28□□□□□ -0.76
SNX27-201ENST00000368838 ZBTB21Q9ULJ3 1066 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 TPCN1Q9ULQ1 816 aa10.28□□□□□ -0.76
SNX27-201ENST00000368838 RLFQ13129 1914 aa10.27□□□□□ -0.76
SNX27-201ENST00000368838 GRXCR2A6NFK2 248 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 PRKAB2O43741 272 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 DHX16O60231 1041 aaKnown RBP10.27□□□□□ -0.77
SNX27-201ENST00000368838 GH2P01242 217 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 APPP05067 770 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 ASNSP08243 561 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 PDCP20941 246 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 TIE1P35590 1138 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 GCLCP48506 637 aaPredicted RBP10.27□□□□□ -0.77
SNX27-201ENST00000368838 TDO2P48775 406 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 BACE1P56817 501 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 ANTXR2P58335 489 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 FOXK1P85037 733 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 PABPC4Q13310 644 aaKnown RBP eCLIP10.27□□□□□ -0.77
SNX27-201ENST00000368838 IRF5Q13568 498 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 CTR9Q6PD62 1173 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 Q6ZUG5 572 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 TBC1D10CQ8IV04 446 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 SMARCC2Q8TAQ2 1214 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 ESR2Q92731 530 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 GTF3C6Q969F1 213 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 PAWRQ96IZ0 340 aaKnown RBP10.27□□□□□ -0.77
SNX27-201ENST00000368838 HTATIP2Q9BUP3 242 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.27□□□□□ -0.77
SNX27-201ENST00000368838 ZNF287Q9HBT7 754 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 TCP11L1Q9NUJ3 509 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 GJD2Q9UKL4 321 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.77
SNX27-201ENST00000368838 SMCHD1A6NHR9 2005 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 SH2B2O14492 632 aaPredicted RBP10.26□□□□□ -0.77
SNX27-201ENST00000368838 BRD1O95696 1058 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 PTMSP20962 102 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 FECHP22830 423 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 NOVP48745 357 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 HERVK_113P62684 666 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 HMGN5P82970 282 aaKnown RBP10.26□□□□□ -0.77
SNX27-201ENST00000368838 SART3Q15020 963 aaKnown RBP10.26□□□□□ -0.77
SNX27-201ENST00000368838 Q3C1V9 767 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 POTEEQ6S8J3 1075 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 FOXP4Q8IVH2 680 aaPredicted RBP10.26□□□□□ -0.77
SNX27-201ENST00000368838 AMOTL1Q8IY63 956 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 TRIB2Q92519 343 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 MAP3K14Q99558 947 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
SNX27-201ENST00000368838 KIF3AQ9Y496 699 aa10.26□□□□□ -0.77
SNX27-201ENST00000368838 MYH4Q9Y623 1939 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 USP17L12C9JPN9 530 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 USP17L21D6R901 530 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 PRC1O43663 620 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 EVI5O60447 810 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 HLA-DOAP06340 250 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 PDIA3P30101 505 aaKnown RBP10.25□□□□□ -0.77
SNX27-201ENST00000368838 PDE4BQ07343 736 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 ACER1Q8TDN7 264 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 SDR42E1Q8WUS8 393 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 BRF1Q92994 677 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 FEZ1Q99689 392 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 EHD4Q9H223 541 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 PORCNQ9H237 461 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 RBPJLQ9UBG7 517 aa10.25□□□□□ -0.77
SNX27-201ENST00000368838 MORF4L1Q9UBU8 362 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms