RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 TIFAQ96CG3 184 aa9.74□□□□□ -0.85
MRPL55-211ENST00000366738 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
MRPL55-211ENST00000366738 ESYT1Q9BSJ8 1104 aa9.74□□□□□ -0.85
MRPL55-211ENST00000366738 PRDM12Q9H4Q4 367 aa9.74□□□□□ -0.85
MRPL55-211ENST00000366738 RPAP3Q9H6T3 665 aaPredicted RBP9.74□□□□□ -0.85
MRPL55-211ENST00000366738 MCM9Q9NXL9 1143 aa9.74□□□□□ -0.85
MRPL55-211ENST00000366738 RAD50Q92878 1312 aa9.74□□□□□ -0.85
MRPL55-211ENST00000366738 GRXCR1A8MXD5 290 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 HIP1O00291 1037 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 SGSM2O43147 1006 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 SEPT4O43236 478 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 SEC24BO95487 1268 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 POLR3DP05423 398 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-211ENST00000366738 RAG1P15918 1043 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 HOXD11P31277 338 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-211ENST00000366738 PBX2P40425 430 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 CCDC85BQ15834 202 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-211ENST00000366738 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 C1orf53Q5VUE5 145 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 OLFML2BQ68BL8 750 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 TMED8Q6PL24 325 aaPredicted RBP9.73□□□□□ -0.85
MRPL55-211ENST00000366738 ATXN2LQ8WWM7 1075 aaKnown RBP9.73□□□□□ -0.85
MRPL55-211ENST00000366738 ASB2Q96Q27 587 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
MRPL55-211ENST00000366738 HELLSQ9NRZ9 838 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 TACC3Q9Y6A5 838 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 CCDC171Q6TFL3 1326 aa9.73□□□□□ -0.85
MRPL55-211ENST00000366738 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 SMCHD1A6NHR9 2005 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 KIAA0355O15063 1070 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 COBLO75128 1261 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 AKR1B1P15121 316 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 USP14P54578 494 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 ADGRE1Q14246 886 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 LENG1Q96BZ8 264 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 STRBPQ96SI9 672 aaKnown RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 MOV10L1Q9BXT6 1211 aaKnown RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 EPB41L4AQ9HCS5 686 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 CABP5Q9NP86 173 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 TRANK1O15050 2925 aa9.72□□□□□ -0.85
MRPL55-211ENST00000366738 TCF20Q9UGU0 1960 aaKnown RBP9.72□□□□□ -0.85
MRPL55-211ENST00000366738 LAMA4Q16363 1823 aa9.71□□□□□ -0.85
MRPL55-211ENST00000366738 PARP14Q460N5 1801 aa9.71□□□□□ -0.85
MRPL55-211ENST00000366738 A0A1W2PQ45 241 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-211ENST00000366738 A0A1W2PQY0 241 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 MPHOSPH10O00566 681 aaKnown RBP9.71□□□□□ -0.86
MRPL55-211ENST00000366738 PGK1P00558 417 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 ERCC3P19447 782 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 MFAP1P55081 439 aaKnown RBP9.71□□□□□ -0.86
MRPL55-211ENST00000366738 MRPS5P82675 430 aaKnown RBP9.71□□□□□ -0.86
MRPL55-211ENST00000366738 PTH1RQ03431 593 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 AKNAD1Q5T1N1 836 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 C12orf60Q5U649 245 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 CASC1Q6TDU7 716 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 TICAM2Q86XR7 235 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.861e-7■■■■□ 24.9
MRPL55-211ENST00000366738 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 LSG1Q9H089 658 aaKnown RBP9.71□□□□□ -0.86
MRPL55-211ENST00000366738 XPNPEP3Q9NQH7 507 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
MRPL55-211ENST00000366738 USP17L12C9JPN9 530 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 USP17L21D6R901 530 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 HSPD1P10809 573 aaKnown RBP9.7□□□□□ -0.86
MRPL55-211ENST00000366738 CDK8P49336 464 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 FAAP100Q0VG06 881 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 TMEM179Q6ZVK1 233 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 SPICE1Q8N0Z3 855 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 RUFY2Q8WXA3 655 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.7□□□□□ -0.86
MRPL55-211ENST00000366738 SPATC1LQ9H0A9 340 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 TMX2Q9Y320 296 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 SLC4A4Q9Y6R1 1079 aa9.7□□□□□ -0.86
MRPL55-211ENST00000366738 GSG1L2A8MUP6 293 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 RARBP10826 455 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 MYH8P13535 1937 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 TAL1P17542 331 aaPredicted RBP9.69□□□□□ -0.86
MRPL55-211ENST00000366738 IGFBP4P22692 258 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 DSG3P32926 999 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 PLS1Q14651 629 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 COG2Q14746 738 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 CTR9Q6PD62 1173 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 C16orf86Q6ZW13 317 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 C16orf59Q7L2K0 433 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 ATG4CQ96DT6 458 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 MAML3Q96JK9 1138 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 BACH2Q9BYV9 841 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 TANGO6Q9C0B7 1094 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 FBXO28Q9NVF7 368 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 SWAP70Q9UH65 585 aa9.69□□□□□ -0.86
MRPL55-211ENST00000366738 GREB1LQ9C091 1923 aaPredicted RBP9.68□□□□□ -0.86
MRPL55-211ENST00000366738 GBF1Q92538 1859 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms