RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 DCDC2CA8MYV0 355 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 ERC2O15083 957 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 GPR37L1O60883 481 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 CYP2E1P05181 493 aaPredicted RBP10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 CYP2C18P33260 490 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 PLCD1P51178 756 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 USP14P54578 494 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 COG2Q14746 738 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 TMEM132BQ14DG7 1078 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 SEPT2Q15019 361 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 KCNA10Q16322 511 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 ABCB5Q2M3G0 1257 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 RNF180Q86T96 592 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 NCAPG2Q86XI2 1143 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 SIAH1Q8IUQ4 282 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 HERVK_113Q902F9 699 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 ATG4CQ96DT6 458 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 SNX27Q96L92 541 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 TINF2Q9BSI4 451 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 STARD7Q9NQZ5 370 aa10.43□□□□□ -0.74
HMGB1P39-201ENST00000366304 ARHGEF15O94989 841 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 BAG3O95817 575 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 PLS1Q14651 629 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 RAB30Q15771 203 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 ZNF792Q3KQV3 632 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 CERKLQ49MI3 558 aaPredicted RBP10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 PPP1R15BQ5SWA1 713 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 ABRAQ8N0Z2 381 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 MIGA1Q8NAN2 632 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 TSEN34Q9BSV6 310 aaKnown RBP10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 MROH8Q9H579 483 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 AKAP2Q9Y2D5 859 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 PCDHGA4Q9Y5G9 962 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 MTCH2Q9Y6C9 303 aa10.42□□□□□ -0.74
HMGB1P39-201ENST00000366304 PRRC2BQ5JSZ5 2229 aaKnown RBP10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 GBF1Q92538 1859 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 RBAK-RBAKDNI3L0D1 243 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 CTAGE5O15320 804 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 SNAI1O95863 264 aaPredicted RBP10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 HLA-DOAP06340 250 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 OTOP2Q7RTS6 562 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 SPRED2Q7Z698 418 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 FAM126BQ8IXS8 530 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 NOL10Q9BSC4 688 aaKnown RBP10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 EHD4Q9H223 541 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 SLC28A3Q9HAS3 691 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 IL23AQ9NPF7 189 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 HOXC10Q9NYD6 342 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 NRBP1Q9UHY1 535 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 SERPINB13Q9UIV8 391 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 MSRAQ9UJ68 235 aa10.41□□□□□ -0.74
HMGB1P39-201ENST00000366304 SRGAP3O43295 1099 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 NUDT7P0C024 238 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 FCER1AP12319 257 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 AKR1A1P14550 325 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 PTGS1P23219 599 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 MRE11P49959 708 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 GABPAQ06546 454 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 GORABQ5T7V8 394 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 SPICE1Q8N0Z3 855 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 DBNDD2Q9BQY9 259 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 CERS4Q9HA82 394 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 LRRC37A2A6NM11 1700 aa10.4□□□□□ -0.74
HMGB1P39-201ENST00000366304 MYO5AQ9Y4I1 1855 aaKnown RBP10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 PI4K2BG5E9Z4 385 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 SMIM22K7EJ46 135 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 CD4P01730 458 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 ASGR1P07306 291 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 POU3F3P20264 500 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 CYP7A1P22680 504 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 ZAP70P43403 619 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 MTX1Q13505 466 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 TMEM199Q8N511 208 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 NUP133Q8WUM0 1156 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 ANKS1AQ92625 1134 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 DDX27Q96GQ7 796 aaKnown RBP10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 MMP19Q99542 508 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 WNT8AQ9H1J5 351 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 MRS2Q9HD23 443 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 SLC5A4Q9NY91 659 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 ADAMTS5Q9UNA0 930 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 WDFY4Q6ZS81 3184 aa10.39□□□□□ -0.75
HMGB1P39-201ENST00000366304 GRIN2DO15399 1336 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 ELP1O95163 1332 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 MOXD2PA6NHM9 499 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 ARVCFO00192 962 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 FLOT1O75955 427 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 FGBP02675 491 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms