RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 LRP10Q7Z4F1 713 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 GDAP1L1Q96MZ0 367 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 NDUFAB1O14561 156 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 ATP1A1P05023 1023 aaKnown RBP16.71■□□□□ 0.27
UBAP1-202ENST00000359544 TM4SF1P30408 202 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 KRT9P35527 623 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 TIMM10P62072 90 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 ZNF662Q6ZS27 426 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 ANKRD18AQ8IVF6 992 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 XAGE2Q96GT9 111 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 LAMB4A4D0S4 1761 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 UBN2Q6ZU65 1347 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
UBAP1-202ENST00000359544 ENC1O14682 589 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 CHUKO15111 745 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 ZBTB43O43298 467 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 FNTAP49354 379 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 GRIN1Q05586 938 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 SSRP1Q08945 709 aaKnown RBP16.71■□□□□ 0.27
UBAP1-202ENST00000359544 NEDD9Q14511 834 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 JAKMIP2Q96AA8 810 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 GSDMAQ96QA5 445 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 RUFY1Q96T51 708 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
UBAP1-202ENST00000359544 A0A087WZG4 1122 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 MEFVO15553 781 aaPredicted RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 YTHDF3Q7Z739 585 aaKnown RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 APPBP2Q92624 585 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 JPH2Q9BR39 696 aaPredicted RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 ANO9A1A5B4 782 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 LRRC10BA6NIK2 292 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 MYBL2P10244 700 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 TDO2P48775 406 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 KRT83P78385 493 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 KRT31Q15323 416 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 CCDC122Q5T0U0 273 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 MICU3Q86XE3 530 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 TMEM87BQ96K49 555 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 CAPZA3Q96KX2 299 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
UBAP1-202ENST00000359544 MYO5AQ9Y4I1 1855 aaKnown RBP16.7■□□□□ 0.26
UBAP1-202ENST00000359544 KRT86O43790 486 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 ZEB2O60315 1214 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 ZMYND10O75800 440 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 MMP1P03956 469 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 NTRK3Q16288 839 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 EHD4Q9H223 541 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
UBAP1-202ENST00000359544 REXO2Q9Y3B8 237 aaKnown RBP16.69■□□□□ 0.26
UBAP1-202ENST00000359544 SAMM50Q9Y512 469 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBAP1-202ENST00000359544 TRIM10Q9UDY6 481 aa16.69■□□□□ 0.26
UBAP1-202ENST00000359544 PPP1R3GB7ZBB8 358 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 SRGAP2O75044 1071 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 SERPINB2P05120 415 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 PLCB4Q15147 1175 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 TMCO5BA8MYB1 307 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 HSF2BPO75031 334 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 RXRAP19793 462 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 CASP7P55210 303 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 CSRNP2Q9H175 543 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 IQSEC3Q9UPP2 1182 aaPredicted RBP16.68■□□□□ 0.26
UBAP1-202ENST00000359544 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
UBAP1-202ENST00000359544 MYO1FO00160 1098 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 MMGT1Q8N4V1 131 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 OR8K1Q8NGG5 319 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 CHP1Q99653 195 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 RABEP2Q9H5N1 569 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBAP1-202ENST00000359544 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBAP1-202ENST00000359544 EPHB4P54760 987 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 KIAA1328Q86T90 577 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 VPS16Q9H269 839 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 MCM8Q9UJA3 840 aa16.67■□□□□ 0.26
UBAP1-202ENST00000359544 CDC25AP30304 524 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 CHRNA5P30532 468 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 802.9 ms