RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
PTPN5-201ENST00000358540 PTPN14Q15678 1187 aa18.16■□□□□ 0.5
PTPN5-201ENST00000358540 NEDD1Q8NHV4 660 aa18.16■□□□□ 0.5
PTPN5-201ENST00000358540 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
PTPN5-201ENST00000358540 NFE2L3Q9Y4A8 694 aa18.16■□□□□ 0.5
PTPN5-201ENST00000358540 CCDC194A0A1B0GVG4 234 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 PALM3A6NDB9 673 aaPredicted RBP18.15■□□□□ 0.5
PTPN5-201ENST00000358540 USP17L5A8MUK1 530 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 CAPN2P17655 700 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 SARSP49591 514 aaKnown RBP18.15■□□□□ 0.5
PTPN5-201ENST00000358540 MORC3Q14149 939 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 SLF2Q8IX21 1173 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 MED15Q96RN5 788 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 COA1Q9GZY4 146 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 CALML3P27482 149 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 CACNB3P54284 484 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 AKT1S1Q96B36 256 aa18.15■□□□□ 0.5
PTPN5-201ENST00000358540 PP2D1A8MPX8 630 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 STXBP3O00186 592 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.5
PTPN5-201ENST00000358540 AKR1B1P15121 316 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 NPR1P16066 1061 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 GNAQP50148 359 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.5
PTPN5-201ENST00000358540 PLIN2Q99541 437 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 PCDHA6Q9UN73 950 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 PCDHA8Q9Y5H6 950 aa18.14■□□□□ 0.5
PTPN5-201ENST00000358540 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.49
PTPN5-201ENST00000358540 SAMSN1Q9NSI8 373 aaKnown RBP18.14■□□□□ 0.49
PTPN5-201ENST00000358540 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
PTPN5-201ENST00000358540 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
PTPN5-201ENST00000358540 DDX60LQ5H9U9 1706 aaKnown RBP18.14■□□□□ 0.49
PTPN5-201ENST00000358540 BMP15O95972 392 aa18.14■□□□□ 0.49
PTPN5-201ENST00000358540 NAPAP54920 295 aa18.14■□□□□ 0.49
PTPN5-201ENST00000358540 CD44P16070 742 aaKnown RBP18.13■□□□□ 0.49
PTPN5-201ENST00000358540 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 NT5DC1Q5TFE4 455 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 PIGSQ96S52 555 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 TRIM34Q9BYJ4 488 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 NFIAQ12857 509 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 OSBPL5Q9H0X9 879 aaPredicted RBP18.13■□□□□ 0.49
PTPN5-201ENST00000358540 BARHL2Q9NY43 387 aa18.13■□□□□ 0.49
PTPN5-201ENST00000358540 FAM196BA6NMK8 535 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPN5-201ENST00000358540 KARSQ15046 597 aaKnown RBP18.12■□□□□ 0.49
PTPN5-201ENST00000358540 KANK3Q6NY19 840 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 INTS13Q9NVM9 706 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 ANKRD31Q8N7Z5 1873 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 CDK5RAP2Q96SN8 1893 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 GSDMDP57764 484 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
PTPN5-201ENST00000358540 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
PTPN5-201ENST00000358540 HNRNPH2P55795 449 aaKnown RBP18.12■□□□□ 0.49
PTPN5-201ENST00000358540 MLKLQ8NB16 471 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 GPCPD1Q9NPB8 672 aa18.12■□□□□ 0.49
PTPN5-201ENST00000358540 NEMFO60524 1076 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 CERS3Q8IU89 383 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 ZFPM1Q8IX07 1006 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 ELOA2Q8IYF1 753 aaPredicted RBP18.11■□□□□ 0.49
PTPN5-201ENST00000358540 RASSF8Q8NHQ8 419 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
PTPN5-201ENST00000358540 RAD21O60216 631 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 TCP10Q12799 353 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 SH3RF1Q7Z6J0 888 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 C4orf32Q8N8J7 132 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 CCDC148Q8NFR7 591 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 MTRQ99707 1265 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 SH3GLB2Q9NR46 395 aa18.11■□□□□ 0.49
PTPN5-201ENST00000358540 M0R2N6 131 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 CHRNA5P30532 468 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 DPYDQ12882 1025 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 CUL4BQ13620 913 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
PTPN5-201ENST00000358540 CDC42EP5Q6NZY7 148 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 TMC4Q7Z404 712 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 TMX4Q9H1E5 349 aaPredicted RBP18.1■□□□□ 0.49
PTPN5-201ENST00000358540 ZNF446Q9NWS9 450 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 IMPACTQ9P2X3 320 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 SMCO2A6NFE2 343 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 PDE6BP35913 854 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 LETM2Q2VYF4 491 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 C2CD5Q86YS7 1000 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 SPATA20Q8TB22 786 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 FAM53CQ9NYF3 392 aa18.1■□□□□ 0.49
PTPN5-201ENST00000358540 MYH1P12882 1939 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 TULP2O00295 520 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 ALDH1B1P30837 517 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 E2F4Q16254 413 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 JAKMIP3Q5VZ66 844 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 RRP36Q96EU6 259 aaKnown RBP18.09■□□□□ 0.49
PTPN5-201ENST00000358540 MASTLQ96GX5 879 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 SEC63Q9UGP8 760 aaKnown RBP18.09■□□□□ 0.49
PTPN5-201ENST00000358540 MAPK8IP1Q9UQF2 711 aa18.09■□□□□ 0.49
PTPN5-201ENST00000358540 RBM5P52756 815 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPN5-201ENST00000358540 IQUBQ8NA54 791 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms