RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 PALM3A6NDB9 673 aaPredicted RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 RPN1P04843 607 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 LMOD1P29536 600 aaPredicted RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 PTGDRQ13258 359 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NR5A1Q13285 461 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ZNF174Q15697 407 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 GPATCH4Q5T3I0 446 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 HEATR3Q7Z4Q2 680 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TMTC1Q8IUR5 882 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 RETREG2Q8NC44 543 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CDK5RAP3Q96JB5 506 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 MRIQ9BWK5 157 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 MKRN1Q9UHC7 482 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 ABCB11O95342 1321 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 VWA3AA6NCI4 1184 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 STXBP3O00186 592 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ATP8B1O43520 1251 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 OR52Z1P0C646 297 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 MCM3P25205 808 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 UBA7P41226 1012 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ADCY7P51828 1080 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 PSMD2Q13200 908 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 HHIPL2Q6UWX4 724 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CYP26C1Q6V0L0 522 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NEK8Q86SG6 692 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 PDILTQ8N807 584 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 OXER1Q8TDS5 423 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TGFBRAP1Q8WUH2 860 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 DCAF4Q8WV16 495 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ZNF592Q92610 1267 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TSG101Q99816 390 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ZMYND12Q9H0C1 365 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 DHX36Q9H2U1 1008 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 EHMT1Q9H9B1 1298 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 DISC1Q9NRI5 854 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 EXOC1Q9NV70 894 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 PCDHA6Q9UN73 950 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 PCDHA8Q9Y5H6 950 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 FLT1P17948 1338 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 AFF2P51816 1311 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 COL4A1P02462 1669 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 KIF5CO60282 957 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 PRDX5P30044 214 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 MCM7P33993 719 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CDK8P49336 464 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 HDLBPQ00341 1268 aaKnown RBP4.2□□□□□ -1.74
RNF38-203ENST00000353739 LRMPQ12912 555 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 NR1I3Q14994 352 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 FAM47AQ5JRC9 791 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ARMCX5Q6P1M9 558 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 ARHGAP27Q6ZUM4 889 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 TSGA10Q9BZW7 698 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 FANCLQ9NW38 375 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 OGFRQ9NZT2 677 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 CTNND2Q9UQB3 1225 aa4.2□□□□□ -1.74
RNF38-203ENST00000353739 A0A1W2PQC6 194 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 NPM3O75607 178 aaKnown RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 NOVP48745 357 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 CDKAL1Q5VV42 579 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 CC2D2BQ6DHV5 1058 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 IQCEQ6IPM2 695 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 PDXDC2PQ6P474 469 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 SMAP1Q8IYB5 467 aaPredicted RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 CEP112Q8N8E3 955 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 TMEM47Q9BQJ4 181 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 INCENPQ9NQS7 918 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 ATP6V0A2Q9Y487 856 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 PARP3Q9Y6F1 533 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 PPFIA3O75145 1194 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 TTLL1O95922 423 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 USP17L8P0C7I0 530 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 RASA1P20936 1047 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 E2F4Q16254 413 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 FKBP15Q5T1M5 1219 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 CABP7Q86V35 215 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 SEPT12Q8IYM1 358 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 TBC1D16Q8TBP0 767 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 NELFBQ8WX92 580 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 GJB4Q9NTQ9 266 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 SNED1Q8TER0 1413 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 DTNBO60941 627 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 PRDM1O75626 825 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 IPO7O95373 1038 aaKnown RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 PRR29P0C7W0 189 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 ATP2B1P20020 1258 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 MMP14P50281 582 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 CUL4BQ13620 913 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 MFSD14BQ5SR56 506 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 STYK1Q6J9G0 422 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 REXO1Q8N1G1 1221 aaKnown RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 CCDC82Q8N4S0 544 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 CUL5Q93034 780 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 C7orf25Q9BPX7 421 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 NT5C3AQ9H0P0 336 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 GBP3Q9H0R5 595 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 L2HGDHQ9H9P8 463 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 BMP2KQ9NSY1 1161 aaPredicted RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 PPP2R2CQ9Y2T4 447 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms