RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 EN2P19622 333 aaPredicted RBP16.19■□□□□ 0.18
TPM4-202ENST00000344824 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 ZKSCAN3Q9BRR0 538 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 IL17RBQ9NRM6 502 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 GJD2Q9UKL4 321 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 SLC1A4P43007 532 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 RGS19P49795 217 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 TMEM132BQ14DG7 1078 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 TRIB2Q92519 343 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 ESR2Q92731 530 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 MKL1Q969V6 931 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 APBA2Q99767 749 aa16.19■□□□□ 0.18
TPM4-202ENST00000344824 B4E1Z4 1266 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 VWA5AO00534 786 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 KDM4AO75164 1064 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 FGRP09769 529 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 TRIM32Q13049 653 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 MAP2K5Q13163 448 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 CCL14Q16627 93 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 SNRNP48Q6IEG0 339 aaKnown RBP16.18■□□□□ 0.18
TPM4-202ENST00000344824 KCTD1Q719H9 257 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 CPXCR1Q8N123 301 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 JAKMIP1Q96N16 626 aaKnown RBP16.18■□□□□ 0.18
TPM4-202ENST00000344824 KIF2CQ99661 725 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 SYNPO2Q9UMS6 1093 aa16.18■□□□□ 0.18
TPM4-202ENST00000344824 SLC15A5A6NIM6 579 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 PCP11498 1178 aaKnown RBP16.17■□□□□ 0.18
TPM4-202ENST00000344824 PTPREP23469 700 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 STAT3P40763 770 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 STAT2P52630 851 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 ANAPC15P60006 121 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 ADCK5Q3MIX3 580 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 MORN1Q5T089 497 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 SHCBP1Q8NEM2 672 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 KCNB2Q92953 911 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
TPM4-202ENST00000344824 ZBED4O75132 1171 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 ADORA2AP29274 412 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 GRB14Q14449 540 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 STOX1Q6ZVD7 989 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 DPP9Q86TI2 863 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 PRPF38AQ8NAV1 312 aaKnown RBP16.16■□□□□ 0.18
TPM4-202ENST00000344824 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■■■ 31.9
TPM4-202ENST00000344824 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 MCM3APO60318 1980 aa16.16■□□□□ 0.18
TPM4-202ENST00000344824 FRMPD2Q68DX3 1309 aaPredicted RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 E7EWF7 191 aa16.15■□□□□ 0.18
TPM4-202ENST00000344824 SLC25A27O95847 323 aa16.15■□□□□ 0.18
TPM4-202ENST00000344824 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 PRKAR2AP13861 404 aaKnown RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 CPA1P15085 419 aa16.15■□□□□ 0.18
TPM4-202ENST00000344824 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 IQCA1Q86XH1 822 aa16.15■□□□□ 0.18
TPM4-202ENST00000344824 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
TPM4-202ENST00000344824 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 MROH8Q9H579 483 aa16.15■□□□□ 0.18
TPM4-202ENST00000344824 RAVER2Q9HCJ3 691 aaKnown RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 ZNF214Q9UL59 606 aaPredicted RBP16.15■□□□□ 0.18
TPM4-202ENST00000344824 KRT32Q14532 448 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 CCDC174Q6PII3 467 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 FAM160B2Q86V87 743 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 RIOX2Q8IUF8 465 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
TPM4-202ENST00000344824 REPS2Q8NFH8 660 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 NPLOC4Q8TAT6 608 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
TPM4-202ENST00000344824 CHURC1Q8WUH1 139 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 DCAF4Q8WV16 495 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 USP6NLQ92738 828 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 MMP19Q99542 508 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 TEX13BQ9BXU2 312 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 KRT23Q9C075 422 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 HOMER2Q9NSB8 354 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 TCP11L1Q9NUJ3 509 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 ADAMTS5Q9UNA0 930 aa16.14■□□□□ 0.17
TPM4-202ENST00000344824 TNKSO95271 1327 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 GJB1P08034 283 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 FCER1AP12319 257 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 XRCC5P13010 732 aaKnown RBP16.13■□□□□ 0.17
TPM4-202ENST00000344824 SNAP25P60880 206 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 TRDNQ13061 729 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 KCTD2Q14681 263 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 RABEP1Q15276 862 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 SHISA4Q96DD7 197 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 UBAC1Q9BSL1 405 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 HMX1Q9NP08 348 aaPredicted RBP16.13■□□□□ 0.17
TPM4-202ENST00000344824 GPCPD1Q9NPB8 672 aa16.13■□□□□ 0.17
TPM4-202ENST00000344824 STRNO43815 780 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 PSMA5P28066 241 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 COPB2P35606 906 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 SLC16A2P36021 539 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms